1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGCGATTAGCATCCCGCTGCTTGCAATATGAAGCACGTGACCGGCCAAATTTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTgtaatgttctttcttattgtattttcatgttaaaattcttacgccatggtgattattgagtatgcaaatgtcccttgttagattttgtttcaattgtata...
species | Zea mays |
transcript | GRMZM2G121826_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATTTGAAAACGGTGGTATCTGGTCTCGAATGTCTCCAGAAAGATGTTTCT ACTCCTTCACACACTTTGCTGAGGATCEST: gi|32866507|gb|CF006189.1|CF006189
genomic: ATTTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTgtaatgttct ... tttaatgcagACTCCTTCACACACTTTGCTGGGGATC
EST: TTTGAAAACGGGTGGTATCTGGTCTCGAATGTCTCCAGAAAGATGTTTCT ACTCCTTCACACACTTTGCTGGGGATCCAAACATGATAATAAAAACTCAGAEST: gi|32866508|gb|CF006190.1|CF006190
genomic: TTTGAAAAC-GGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTgtaatgttct ... tttaatgcagACTCCTTCACACACTTTGCTGGGGATCC-AACATGATAATAAAAACTCAGA
EST: ATTTGAAAACGGTGGTATCTGGTCTCGAATGTCTCCAGAAAGATGTTTCT ACTCCTTCACACACTTTGCTGGGGATCCAACATGATAATAAAAACTCAGAT
genomic: ATTTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTgtaatgttct ... tttaatgcagACTCCTTCACACACTTTGCTGGGGATCCAACATGATAATAAAAACTCAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCGATTAGCATCCCGCTGCTTGCAATATGAAGCACGTGACCGGCCAAATTTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTgtaatgttctttcttattgtattttcatgttaaaattcttacgccatggtgattattgagtatgcaaatgtcccttgttagattttgtttcaattgtata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG