1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGCAGCCACAGAATCAGTTGCTGCTGACAAAAAGCTTGCTATATTTGATAAAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTGgtatgcaatttgttgtttttacttgctatacttagtacagacaaacgtactagaaaatagagatgtgttatatgatagttacagtttgtattttaacatttttttttctgaatgtag
species | Zea mays |
transcript | GRMZM2G121022_T04 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTG GCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTGAATGGTCTTGACEST: gi|31358954|gb|CD443311.1|CD443311
genomic: AAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTGgtatgcaatt ... ctgaatgtagGCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTGAATGGTCTTGAC
EST: AAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTG GCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTGAATGGTCTTGAC
genomic: AAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTGgtatgcaatt ... ctgaatgtagGCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTGAATGGTCTTGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAGCCACAGAATCAGTTGCTGCTGACAAAAAGCTTGCTATATTTGATAAAATATTTTCTGCATACCATGATGCTCGGAGCTGCATCCGCAATGACCTGgtatgcaatttgttgtttttacttgctatacttagtacagacaaacgtactagaaaatagagatgtgttatatgatagttacagtttgtattttaacatttttttttctgaatgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC