1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGATGCTAACGGTATCCTTTCTGTCACTGCCGTGGACAAGGGTACAGGGAAGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAGgtatgtttccagcaagtgaatgtactgtcatgttcttggtagtactgttcgacgtttctgaatgatttgattgacttgtatcaaacgaaaaccgtctag
species | Zea mays |
transcript | GRMZM2G111475_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAG GTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAGEST: gi|31349779|gb|CD434136.1|CD434136
genomic: AGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAGgtatgtttcc ... aaccgtctagGTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAG
EST: AGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAG GTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAGEST: gi|91052124|gb|EB162542.1|EB162542
genomic: AGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAGgtatgtttcc ... aaccgtctagGTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAG
EST: CAAAGGACGAG GTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAG
genomic: CAAAGGACGAGgtatgtttcc ... aaccgtctagGTGGAGAGGATGGTTGACGAAGCTGAGAAGTTTGCAAAGGAGGATAAGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGCTAACGGTATCCTTTCTGTCACTGCCGTGGACAAGGGTACAGGGAAGAAGCAGGATATTACAATTACTGGTGCCAGCACTCTGCCAAAGGACGAGgtatgtttccagcaagtgaatgtactgtcatgttcttggtagtactgttcgacgtttctgaatgatttgattgacttgtatcaaacgaaaaccgtctag
- - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC