1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGGGGAAGTGGGCTAGCTCCCTGGCCTGCTCGATTAACAACCCCGCCTCCCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgaccttacaatgtctttatgatcatgacataccgtttatcttcaaaactttcttatttgagtctgaagaactgcataaagattgctggtgtaattcttgctgtgcag
species | Zea mays |
transcript | GRMZM2G107629_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACG GAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAGEST: gi|87157567|gb|DY402356.1|DY402356
genomic: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgac ... tgctgtgcagGAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
EST: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACG GAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAGEST: gi|211429892|gb|FL442320.1|FL442320
genomic: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgac ... tgctgtgcagGAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
EST: CCCGTCTTGNTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACG GAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAGEST: gi|22935914|gb|BU572189.1|BU572189
genomic: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgac ... tgctgtgcagGAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
EST: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACG GAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAGEST: gi|149009042|gb|EE153770.2|EE153770
genomic: CCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgac ... tgctgtgcagGAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
EST: GATTTGTATGTTACTGCTGACACATTTGAAAAGGACACG GAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
genomic: GATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgac ... tgctgtgcagGAAATGTGGCAGCAACGAGTAGAAAAATATTGGAGTTTGTTGGGCCCAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGGGAAGTGGGCTAGCTCCCTGGCCTGCTCGATTAACAACCCCGCCTCCCCGTCTTGCTGATTTGTATGTTACTGCTGACACATTTGAAAAGGACACGgttagttgaccttacaatgtctttatgatcatgacataccgtttatcttcaaaactttcttatttgagtctgaagaactgcataaagattgctggtgtaattcttgctgtgcag
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