1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTCCAAATCTTCCCCGGTGAGGGGATTTACGGTGAGATCGATGGGGAAGGTGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAGgttggttaacacatatagtagcaagtttttttttttgtttcagggatattaattaacaattatcaactctaaaaatgtttgtgttttgtccttcacccat...
species | Zea mays |
transcript | GRMZM2G099191_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAG TTCCTGACATGAAEST: gi|148934258|gb|EC878280.2|EC878280
genomic: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAGgttggttaac ... tcttctctagTTCCTGACATGAA
EST: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAG TTCCTGACATGAAAGATATGAAAGGAGEST: gi|31354681|gb|CD439038.1|CD439038
genomic: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAGgttggttaac ... tcttctctagTTCCTGACATGAAAGATATGAAAGGAG
EST: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAG TTCCTGACATGAAAGATATGAAAGGAGTTACCGTCGGATACGTTGCCTGCA
genomic: TGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAGgttggttaac ... tcttctctagTTCCTGACATGAAAGATATGAAAGGAGTTACCGTCGGATACGTTGCCTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCAAATCTTCCCCGGTGAGGGGATTTACGGTGAGATCGATGGGGAAGGTGTGTATATTGGGAACAAGAGGATTTTGTCAAGGGCCTCATGTGAAACAGgttggttaacacatatagtagcaagtttttttttttgtttcagggatattaattaacaattatcaactctaaaaatgtttgtgttttgtccttcacccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT