1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCCAGAGATGTATAACAATGACTTCACCACTCCCTTGCAAGTTGTTATCGACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttgatctgtgtattgttgttactatttattctaagacatcgcatcgagtgtaaagaatttccaatggcacag
species | Zea mays |
transcript | GRMZM2G092459_T02 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAG AATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGGEST: gi|50332358|gb|CO527484.1|CO527484
genomic: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttga ... aatggcacagAATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGG
EST: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAG AATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGGEST: gi|31441053|gb|CD510484.1|CD510484
genomic: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttga ... aatggcacagAATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGG
EST: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAG AATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGGEST: gi|31406260|gb|CD484992.1|CD484992
genomic: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttga ... aatggcacagAATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGG
EST: ACAGGTGCATCCAATCATCCCCAATTGACCCAAGGAGGGCTCTTTATAAG AATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGG
genomic: ACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttga ... aatggcacagAATATTGTCTTGTCTGGAGGCTCGACTATGTTTAAAGATTTCCATAGGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAGAGATGTATAACAATGACTTCACCACTCCCTTGCAAGTTGTTATCGACAGGTGCATCCAATCATCCCCAATTGACACAAGGAGGGCTCTTTATAAGgttttgttgatctgtgtattgttgttactatttattctaagacatcgcatcgagtgtaaagaatttccaatggcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG