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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAATACTGGGCGTGCAGTACTCGGTTCCAGACTACGTCCACATATCTCCGGAATGCCAGGACCTAATCTCCAGGATCTTCGTCGCCAACCCGTCCACCgtgagtacttccggcttcgtgatgtcgttcacgagcctgcctttgagcggatcgctgacatgcacagcatgacacgccgtgtgcag

Basic information

species Zea mays
transcript GRMZM2G081915_T02
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86467283|gb|DY233653.1|DY233653
EST:     CGGAATGCCAGGACCTAATCTCCAGGATCTTCGTCGCCAACCCGTCCACC                         AGGATCACCATGCCCGAGATACGGAGCCACCCTTGGTTCCTGAAGAACCTC
genomic: CGGAATGCCAGGACCTAATCTCCAGGATCTTCGTCGCCAACCCGTCCACCgtgagtactt ... ccgtgtgcagAGGATCACCATGCCCGAGATACGGAGCCACCCTTGGTTCCTGAAGAACCTC
EST: gi|148928123|gb|EC872637.2|EC872637
EST:     CGGAATGCCAGGACCTAATCTCCAGGATCTTCGTCGCCAACCCGTCCACC                         AGGATCACCATGCCCGAGATACGGAGCCACCCTTGGTTCCTGAAGAACCTC
genomic: CGGAATGCCAGGACCTAATCTCCAGGATCTTCGTCGCCAACCCGTCCACCgtgagtactt ... ccgtgtgcagAGGATCACCATGCCCGAGATACGGAGCCACCCTTGGTTCCTGAAGAACCTC