1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACTTGGAATCCTGATCGCGGTGATCGGGATGGTCCTGTACTCGTACTTCTGCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtatgttctgcaacggttagctgagtttcatgggtagtagtaccatgtgttttgagcagacagattcccatggatagggtctggttgttggttt...
species | Zea mays |
transcript | GRMZM2G081848_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATC CTGCAGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGCEST: gi|148936001|gb|EC880057.2|EC880057
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtat ... atcggtaccaC---AGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGC
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCC TEST: gi|148936001|gb|EC880057.2|EC880057
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCAT-Cctgcaggtat ... atcggtacca-
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCC TEST: gi|148936001|gb|EC880057.2|EC880057
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCAT-Cctgcaggtat ... atcggtacca-
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCC TEST: gi|149097658|gb|EE183555.2|EE183555
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCAT-Cctgcaggtat ... atcggtacca-
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATC CTGCAGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGCEST: gi|50322319|gb|CO517445.1|CO517445
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtat ... atcggtaccaC---AGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGC
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATC CTGCAGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGCEST: gi|149102836|gb|EE288178.2|EE288178
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtat ... atcggtaccaC---AGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGC
EST: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATC CTGCAGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGC
genomic: GCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtat ... atcggtaccaC---AGGCAAAGGAGGGTGAATCGAACCCTCTGATCTTGGATTCCCTGAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTGGAATCCTGATCGCGGTGATCGGGATGGTCCTGTACTCGTACTTCTGCACTAGAGAGACTCAGCAGAAGCCGGCAGAGGCCTCCCCGCAAGCCATCctgcaggtatgttctgcaacggttagctgagtttcatgggtagtagtaccatgtgttttgagcagacagattcccatggatagggtctggttgttggttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC