1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TAAGAAGGGGACAAAAGGAGATGTTTCTGTACTGAATCCTACTCTTATAATTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttatttcctgaattttatatttccaccaaatgtcattgattagcattgttaccattagaatattctacgtatatggtaataataacccactgag...
species | Zea mays |
transcript | GRMZM2G079236_T02 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAA GTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAGEST: gi|211103068|gb|FL309408.1|FL309408
genomic: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttat ... ctctttccagGTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAG
EST: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAA GTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAGEST: gi|211440066|gb|FL316513.1|FL316513
genomic: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttat ... ctctttccagGTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAG
EST: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAA GNTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAGEST: gi|211485905|gb|FL317496.1|FL317496
genomic: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttat ... ctctttccagGTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAG
EST: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAA GTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAG
genomic: TTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttat ... ctctttccagGTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTGCATATAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAGAAGGGGACAAAAGGAGATGTTTCTGTACTGAATCCTACTCTTATAATTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTGTTTAAGAAAgtgagtttatttcctgaattttatatttccaccaaatgtcattgattagcattgttaccattagaatattctacgtatatggtaataataacccactgag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA