1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTCGACGAGGAAACTCTTAATGATGTTATTAAGATGGGTTTTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctctactctctgtttcttttggttgttttatggtatcatgacacagtcagctgtgcag
species | Zea mays |
transcript | GRMZM2G077278_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTEST: gi|76934830|gb|DV174040.1|DV174040
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTEST: gi|76933421|gb|DV173441.1|DV173441
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTEST: gi|15312951|gb|BI478479.1|BI478479
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTEST: gi|67028292|gb|CO457041.1|CO457041
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTEST: gi|211429825|gb|FL327475.1|FL327475
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
EST: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAG GCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
genomic: TTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctc ... agctgtgcagGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGACGAGGAAACTCTTAATGATGTTATTAAGATGGGTTTTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGgtatctgctctactctctgtttcttttggttgttttatggtatcatgacacagtcagctgtgcag
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