1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CGGGAAGCTCAAGAGAGCGACCACCGCACTGGAGGCCGAAGGGAAGGGACGAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatctctagcctctacatattcttgtcgtctcatggatctagcctaccgtttggtgtctggtgatgggattctaggatcaattctattttgtagg...
species | Zea mays |
transcript | GRMZM2G075719_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAG AAGGATGAGTGAAGAGGATAAGGCTGCTACTTYTGCTGAGCACCGAAGAGGEST: gi|211411432|gb|FL197897.1|FL197897
genomic: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatct ... ctatctacagAAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGG
EST: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAG AAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGGEST: gi|211408894|gb|FL197896.1|FL197896
genomic: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatct ... ctatctacagAAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGG
EST: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAG AAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGGEST: gi|211411433|gb|FL197898.1|FL197898
genomic: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatct ... ctatctacagAAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGG
EST: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAG AAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAAG
genomic: GAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatct ... ctatctacagAAGGATGAGTGAAGAGGATAAGGCTGCTACTTCTGCTGAGCACCGAAGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGGAAGCTCAAGAGAGCGACCACCGCACTGGAGGCCGAAGGGAAGGGACGAGATCGTTGAATCGCAGGTGGACGGCTAGGATTGGTCGCCTGAGGCGAGgtcaaaatctctagcctctacatattcttgtcgtctcatggatctagcctaccgtttggtgtctggtgatgggattctaggatcaattctattttgtagg
- - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA