1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATGCTGAAGAATGCAAGCATCGAAGAGgtaatacgctctgtcatcgcaacaattctaatcattttttactttgggacttgatggaccgaaaacaagtgatgttataagactttgctctgacgaattc...
species | Zea mays |
transcript | GRMZM2G074173_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGCTGAAGAATGCAAGCATCGAAGAG ATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAAEST: gi|50323708|gb|CO518834.1|CO518834
genomic: ATGCTGAAGAATGCAAGCATCGAAGAGgtaatacgct ... ttttactcagATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAA
EST: ATGCTGAAGAATGCAAGCATCGAAGAG ATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAAEST: gi|71417762|gb|DR804204.1|DR804204
genomic: ATGCTGAAGAATGCAAGCATCGAAGAGgtaatacgct ... ttttactcagATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAA
EST: ATGCTGAAGAATGCAAGCATCGAAGAG ATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAA
genomic: ATGCTGAAGAATGCAAGCATCGAAGAGgtaatacgct ... ttttactcagATCCAGACAATTCAGCGGGTGAAGGAAGAAAGAGATAACATGCTTCAGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGAAGAATGCAAGCATCGAAGAGgtaatacgctctgtcatcgcaacaattctaatcattttttactttgggacttgatggaccgaaaacaagtgatgttataagactttgctctgacgaattc
- CTGAAG
- - TGAAGA
- - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaacaa