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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTCTGGAAATTCGTAACTTGACATTGTTAACACCAAGAAGTGGAAATGTTCTTATTACTGGCCTCACTATGGAACTAAAAGACAAGGACCACCTACTGgtattccatttctttaactacttgcacattcggcaaaacaaatgttatctctgtacgcttgactcatcgctgaggtgctatgctttttttcactttag

Basic information

species Zea mays
transcript GRMZM2G074103_T02
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G074103_T04 (Zea mays), 5'ss of exon 7
lower sequence: LOC_Os01g11946.1 (Oryza sativa), 5'ss of exon 7
GGTTCTGGAAATTCGTAACTTGACATTGTTAACACCAAGAAGTGGAAATGTTCTTATTACTGGCCTCACTATGGAACTAAAAGACAAGGACCACCTACTGgtattccatttctttaactacttgcacattcggcaaaacaaatgttatctctgtacgcttgactcatcgctgaggtgctatgct--ttttttcactttag
|||||| || ||| |||| |||||||| |||||||| || ||||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||   |||||||| ||||| ||  | | |  || |  |    ||  | | ||    || |   |  | |||| |  ||| |  ||||||  ||||||
GGTTCTTGAGATTTGTAATTTGACATTATTAACACCCAGGAGTGGAAACATTCTTATTACTGACCTCACTATGGAACTCAAAGAAAAGGACCACCTACTGgtatttggtttctttagctactcgcctacttgtaaataggagaaataaatgt-tatcactgccatctgacagaggagaaatgttcattttttgcctttag