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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCTGAGTGCAATTGTTCCTGCCCGGGATAAACAGACCATCATAAAAACAGCTATCAGTAAGgtagatacacttttttattgttgtgcctatgaattatttttatggtattgcttagtaaaaattatctctttgatgaaccactgacactaacttctactgcag

Basic information

species Zea mays
transcript GRMZM2G073934_T02
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G073934_T01 (Zea mays), 5'ss of exon 8
lower sequence: LOC_Os10g37430.1 (Oryza sativa), 5'ss of exon 8
GAGCTGAGTGCAATTGTTCCTGCCCGGGATAAACAGACCATCATAAAAACAGCTATCAGTAAGgtagatacacttttttattgttgtgcctatgaattattttt-atggtattgcttagtaaaaattatctctttgatgaaccactgacactaacttctactgcag
|| ||||||||||||||||| || || || || || |||||||||||||||||||| |||||||||||| || ||| | |||  |||||    |||| |||||| ||| |  |   |  || ||| |||     || |||  | |     || |  |||   ||||
GAACTGAGTGCAATTGTTCCGGCTCGTGAGAAGCAAACCATCATAAAAACAGCTATAAGTAAGgtagatgcaatttct-attactgtgc--gagaatcatttttgatgattgtatcttctataaactattgggctgttgacgccccccttctgatgtct-tggcag