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ATTACTCCTGCAAAGGATGGAAAACCTGTGCTCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttctgatatctttcaatctttggcaacttgcttttgttcttttggattacttttgccattcatcgctttgttatggtataatggtgcaactac...
species | Zea mays |
transcript | GRMZM2G073774_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGEST: gi|67016819|gb|CO445568.1|CO445568
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAG
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTTEST: gi|6536537|gb|AW224850.1|AW224850
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTTEST: gi|31354606|gb|CD438963.1|CD438963
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTTEST: gi|6626525|gb|AW258057.1|AW258057
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTTEST: gi|32932110|gb|CF036922.1|CF036922
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTTEST: gi|31353176|gb|CD437533.1|CD437533
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
EST: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAG GTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
genomic: TCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttc ... ttgtgtgtagGTTGACGCAGCCCTTATAGCTACAGGAAGGGCGCCATTCACCAAAGGGCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTACTCCTGCAAAGGATGGAAAACCTGTGCTCATCGAGCTTATTGATGCAAAGACAAAGGAGCACAAAGAAACCCTTGAGgtaacatttctgatatctttcaatctttggcaacttgcttttgttcttttggattacttttgccattcatcgctttgttatggtataatggtgcaactac
- - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA