1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTACTCGTTTTCTATGGTTCCGGCTATTGGAGAGCTGGTTGCTGGTGATCGGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgctgtgaattagtagcacttttgttatcgacaagcatgaacatatgattacattctttgtggcattttctatcccacccatcatctcatctt...
species | Zea mays |
transcript | GRMZM2G065210_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAG GAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATATEST: gi|60357455|gb|DN224428.1|DN224428
genomic: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgc ... accttggcagGAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATAT
EST: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAG GAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATATEST: gi|71440104|gb|DR821154.1|DR821154
genomic: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgc ... accttggcagGAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATAT
EST: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAG GAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATATEST: gi|113813378|gb|DW929781.1|DW929781
genomic: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgc ... accttggcagGAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAATAT
EST: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCAAATCAG GAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAA
genomic: GGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgc ... accttggcagGAAAAGTTTGCTCAGATGATTCAGGAAGCCGGATTCCAGAGGGTGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTACTCGTTTTCTATGGTTCCGGCTATTGGAGAGCTGGTTGCTGGTGATCGGCAGTCGTACCAATACTTGGTTGAGAGCATCCGTCGGTTTCCGAATCAGgtaatggtgctgtgaattagtagcacttttgttatcgacaagcatgaacatatgattacattctttgtggcattttctatcccacccatcatctcatctt
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