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ATATTTATACAAACTGGATATCCCCTTGACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATGgtatgaagttatttaattagaaccatacattatgggtgtctgcctgttctttcattaaatacaagttaatctagaacataatgtgtgcagttattcaata...
species | Zea mays |
transcript | GRMZM2G061419_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATG CCTTGTTCGATGEST: gi|61119317|gb|DN560278.1|DN560278
genomic: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATGgtatgaagtt ... catactgcagCCTTGTTCGATG
EST: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATG CCTTGTTCGATGGGATTTGCAACTGGTGGGAAGACTTTCTTCTTGTGGGGTEST: gi|78090711|gb|DV519085.1|DV519085
genomic: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATGgtatgaagtt ... catactgcagCCTTGTTCGATGGGATTTGCAACTGGTGGGAAGACTTTCTTCTTGTGGGGT
EST: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATG CCTTGTTCGATGGGATTTGCAACTGGTGGGAAGACTTTCTTCTTGTGGGGT
genomic: ACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATGgtatgaagtt ... catactgcagCCTTGTTCGATGGGATTTGCAACTGGTGGGAAGACTTTCTTCTTGTGGGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATTTATACAAACTGGATATCCCCTTGACTTACCTTCTGGCAGTTTGGGCAGCTATTGCATATATGAATACCACATGgtatgaagttatttaattagaaccatacattatgggtgtctgcctgttctttcattaaatacaagttaatctagaacataatgtgtgcagttattcaata
- - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaatacaa