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GCGAAGCTTGAGCATATTTGGGGATTCTGCTCCTAGAGAGTCCTTTCAAGAACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatattatgtgaacagtattggaaacaaatttactgtatgatgatatgcaaaagaacagattaattctgtagaaactgcactagtttcaattttt...
species | Zea mays |
transcript | GRMZM2G059039_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACEST: gi|71766575|gb|DR964512.1|DR964512
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGAC
EST: ACTAATTGAAATTATTNCA-GCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGEST: gi|60338080|gb|DN205053.1|DN205053
genomic: ACTAATTGAAATTATT-CAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATG
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCTEST: gi|148943964|gb|EC889044.2|EC889044
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCTEST: gi|32933981|gb|CF038793.1|CF038793
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCTEST: gi|76014976|gb|DT942146.1|DT942146
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCTEST: gi|31356580|gb|CD440937.1|CD440937
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCTEST: gi|31358588|gb|CD442945.1|CD442945
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
EST: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAAC GTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
genomic: AACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatat ... atctttccagGTTTCTGACATTGACCACATTGAGAGGTGGATTTCATGCATGTATATGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGAAGCTTGAGCATATTTGGGGATTCTGCTCCTAGAGAGTCCTTTCAAGAACTAATTGAAATTATTCAAGCACAGGCTGATCTGAATTCACAATTCAACgtaagtatattatgtgaacagtattggaaacaaatttactgtatgatgatatgcaaaagaacagattaattctgtagaaactgcactagtttcaattttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaaagaa