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ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcattatccttcaaaaagatcattggttccggatatgggttttaattctgttatgtattctggaaatacatatattgctatggcgttggctcatct...
species | Zea mays |
transcript | GRMZM2G052880_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGAATTTGGAGTACTTTGCTATTGATTCCCAG GGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAATEST: gi|211501867|gb|FL160495.1|FL160495
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
EST: ATGAATTTGGAGTACTTTGCTATTGATTCCCAG GGTTTCATAACTGACCATGAGAGGGCATTGGGAGGAACTTTTTAGTGAAAAEST: gi|211501856|gb|FL160484.1|FL160484
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAG-AACTTTTTAGTGAAAA
EST: ATGAATTTGGAGTACTTTGCTATTGATTCC-AG GGTTTCATAACTGACCATGAGAGGGCATTGGGAGAATTTTTTAGTGAAAATEST: gi|93015686|gb|EB641206.1|EB641206
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
EST: ATGAATTTGGAGTACTTTGCTATTGATTCCCAG GGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAATEST: gi|76294182|gb|DV033750.1|DV033750
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
EST: ATGAATTTGGAGTACTTTGCTATTGATTCCCAG GGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAATEST: gi|74234513|gb|DT642427.1|DT642427
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
EST: ATGAATTTGGAGTACTTTGCTATTGATTCCCAG GGCTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
genomic: ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcatta ... ttgcatgcagGGTTTCATAACTGACCATGAGAGGGCATTGGAAGAACTTTTTAGTGAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGAATTTGGAGTACTTTGCTATTGATTCCCAGgtaagcattatccttcaaaaagatcattggttccggatatgggttttaattctgttatgtattctggaaatacatatattgctatggcgttggctcatct
- - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaataca