1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
TGGTAGCAGGTGGTTGCATGAAAGAAGCAAAGAAAGTCCAAAGGCAATGAAACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacatctcttgtcatactcatttagttgttattaaatatgttttttgatctaaataattaaatttacag
species | Zea mays |
transcript | GRMZM2G052403_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AACATCTGAATAAGCTTTTCCCAAACAAAATTTTGATCCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|6994163|gb|AW453377.1|AW453377
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTEST: gi|67034427|gb|CO462977.1|CO462977
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGT
EST: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|60399121|gb|DN231935.1|DN231935
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|211051787|gb|FL187605.1|FL187605
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAAATTTTGATCCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|211051788|gb|FL187606.1|FL187606
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAAATTTTGATCCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|211048839|gb|FL187599.1|FL187599
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAAATTTTGATCCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAEST: gi|32801048|gb|CD953284.1|CD953284
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
EST: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAG GATGAAGCTCTACTTACAGATTGGAAGCAGCAGNTGGATCGTGATGTTGAA
genomic: AACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacat ... aaatttacagGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTAGCAGGTGGTTGCATGAAAGAAGCAAAGAAAGTCCAAAGGCAATGAAACATCTGAATAAGCTTTTCCCAAACAAGATTTCGATTCAGCTTCCGCAGgtgattacatctcttgtcatactcatttagttgttattaaatatgttttttgatctaaataattaaatttacag
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