1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTGTGTGCTTCCCACAGCCGAACATTTTCCATGTTAAATGGATATGGTGCTCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCGgtaaaactctacaatctatacctgtcacagcaattgattatggtcttggttggtatgctatagtattacgcctgtcatgctagacgtgccagagacccag...
species | Zea mays |
transcript | GRMZM2G051262_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCG GGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCTEST: gi|60352444|gb|DN219417.1|DN219417
genomic: TCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCGgtaaaactct ... atgtttgcagGGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCT
EST: TGATGACACTGGACCCG GGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCTEST: gi|6538807|gb|AW224946.1|AW224946
genomic: TGATGACACTGGACCCGgtaaaactct ... atgtttgcagGGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCT
EST: TCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCG GGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCTEST: gi|211283929|gb|FL480867.1|FL480867
genomic: TCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCGgtaaaactct ... atgtttgcagGGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCT
EST: ATCTATCAGCATCTAGAACATCATGATGACACTGGACCCG GGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCT
genomic: ATCTATCAGCATCTAGAACATCATGATGACACTGGACCCGgtaaaactct ... atgtttgcagGGTCTATTCTGTGTGTTGGAAGTGAGTGGCATCGCTATCCATCATCGTTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTGTGCTTCCCACAGCCGAACATTTTCCATGTTAAATGGATATGGTGCTCCCCTGCAGATCTATCAGCATCTAGAACATCATGATGACACTGGACCCGgtaaaactctacaatctatacctgtcacagcaattgattatggtcttggttggtatgctatagtattacgcctgtcatgctagacgtgccagagacccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT