1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GCATTCAACCGATCGTGAAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccctgtacttttaacctctgcagacattttgcattttttaaaaaaagcaaacatagctgtaaattgttattaacgggttgcctttttattgtag
species | Zea mays |
transcript | GRMZM2G037342_T02 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAA TTGCTCGATTTGAGTGGCATTCTCACTGTGTTTTTCTGCGGTATCGTAEST: gi|71426858|gb|DR807908.1|DR807908
genomic: AAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccc ... tttattgtagTTGCTCGATTTGAGTGGCATTCTCACTGTGTTTTTCTGCGGTATCGTA
EST: AAGTTTCCATTATGATGCTAATGGCTTATTTATCCTACATGCTAGCTGAA TTGCTCGATTTEST: gi|149058822|gb|EE156843.2|EE156843
genomic: AAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccc ... tttattgtagTTGCTCGATTT
EST: AAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAA TTGCTCGATTTEST: gi|149015463|gb|EE045330.2|EE045330
genomic: AAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccc ... tttattgtagTTGCTCGATTT
EST: AAGTT-CCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAA TTGCTCGATTT
genomic: A-GTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccc ... tttattgtagTTGCTCGATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATTCAACCGATCGTGAAGTTTCCATTATGATGCTAATGGCTTATTTATCTTACATGCTAGCTGAAgtgagcaccctgtacttttaacctctgcagacattttgcattttttaaaaaaagcaaacatagctgtaaattgttattaacgggttgcctttttattgtag
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