1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCAGAAGCTTGAAAGTCCTGCCTTACATCACTATGTAATGTTTTCCAGGAATGTACTTGCAGCTTCCACCACTATCAATTCAACGGTTATGAACTCCCAGgtataccattatttttcaaataatctaaaaatcgtgtggaattcatcttggtcactaacttatgcccaataacacatttcag
species | Zea mays |
transcript | GRMZM2G036918_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGTACTTGCAGCTTCCACCACTATCAATTCAACGGTTATGAACTCCCAG GATTCAGACCACATTGTTTTCCATGTATTCACTGATGCACAAAACTTTTATEST: gi|37659535|gb|CF752097.1|CF752097
genomic: ATGTACTTGCAGCTTCCACCACTATCAATTCAACGGTTATGAACTCCCAGgtataccatt ... cacatttcagGATTCGGACCACATCGTTTTCCATGTATTCACTGATGCACAAAACTTTTAT
EST: CAACGGTTATGAACTCCCAG GATTCGGACCACATTGTTTTCCATGTATTCACTGATGCACAAAACTTTTATEST: gi|34995113|gb|CF569030.1|CF569030
genomic: CAACGGTTATGAACTCCCAGgtataccatt ... cacatttcagGATTCGGACCACATCGTTTTCCATGTATTCACTGATGCACAAAACTTTTAT
EST: CAACGGTTATGAACTCCCAG GATTCGGACCACATTGTTTTCCATGTATTCACTGATGCACAAAACTTTTAT
genomic: CAACGGTTATGAACTCCCAGgtataccatt ... cacatttcagGATTCGGACCACATCGTTTTCCATGTATTCACTGATGCACAAAACTTTTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGAAGCTTGAAAGTCCTGCCTTACATCACTATGTAATGTTTTCCAGGAATGTACTTGCAGCTTCCACCACTATCAATTCAACGGTTATGAACTCCCAGgtataccattatttttcaaataatctaaaaatcgtgtggaattcatcttggtcactaacttatgcccaataacacatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT