1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AGAGTACGCAGAGAAGATGATAGACGCAATCGACAGAGTACGAGTTCGAGGGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtacccctgatttttggtgtctttgagccagccatcatcgacatgcatgtatctgaactaatcaaccgatacgatctgtgtctgggcaacaacaaaaaatgtacag
species | Zea mays |
transcript | GRMZM2G036861_T02 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGC GGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCTEST: gi|211012763|gb|FL448392.1|FL448392
genomic: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtaccc ... aaatgtacagGGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
EST: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGC GGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCTEST: gi|76281789|gb|DV021357.1|DV021357
genomic: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtaccc ... aaatgtacagGGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
EST: TCGCTAGAAACGTTCCTCGC GGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCTEST: gi|149098824|gb|EE184837.2|EE184837
genomic: TCGCTAGAAACGTTCCTCGCgtaagtaccc ... aaatgtacagGGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
EST: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGC GGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCTEST: gi|78109644|gb|DV528060.1|DV528060
genomic: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtaccc ... aaatgtacagGGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
EST: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGC GGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
genomic: GGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtaccc ... aaatgtacagGGGCTCGGTTCTCCTGTGTTCGACAAGCTCGAATCCGAACTGGCAAAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAGTACGCAGAGAAGATGATAGACGCAATCGACAGAGTACGAGTTCGAGGGGATTCGGTCGGTGGAGTGATCACATGCGTCGCTAGAAACGTTCCTCGCgtaagtacccctgatttttggtgtctttgagccagccatcatcgacatgcatgtatctgaactaatcaaccgatacgatctgtgtctgggcaacaacaaaaaatgtacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG