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GTTCTTGCTTACACTGGTAATGAAGATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAGgtaattgctgaatatgaaatgcaccgtatgactattgctaatggttaacactgagactgagtattcattatgttactaaatttaagctgattttttacat...
species | Zea mays |
transcript | GRMZM2G033829_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAG GACTTCGCGGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCTEST: gi|17970051|gb|BM276819.1|BM276819
genomic: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAGgtaattgctg ... tcatgcacagGACTTCGCTGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCT
EST: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAG GACTTCGCGGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCTEST: gi|5525515|gb|AI861408.1|AI861408
genomic: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAGgtaattgctg ... tcatgcacagGACTTCGCTGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCT
EST: GAGGTGTCACTTGAAGCCATTAAG GACTTCGCGGAAGGTTTCTTGGAAGACAAACTTACATCATTCTACAAGTCTEST: gi|18385207|gb|BM418406.1|BM418406
genomic: GAGGTGTCACTTGAAGCCATTAAGgtaattgctg ... tcatgcacagGACTTCGCTGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCT
EST: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAG GACTTCGCGGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCT
genomic: ATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAGgtaattgctg ... tcatgcacagGACTTCGCTGAAGGTTTCTTGGAAGACAAACTTACACCATTCTACAAGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCTTGCTTACACTGGTAATGAAGATGCTAGGAAATTTTTCCTTGATGGCGAGGTGTCACTTGAAGCCATTAAGgtaattgctgaatatgaaatgcaccgtatgactattgctaatggttaacactgagactgagtattcattatgttactaaatttaagctgattttttacat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC