1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
TCACTTCAACAAGAACCAGTTGTCTGGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgtgaaaccccccctgtttgaaggctgcttttgcaatccaccgatgtttactgacacccctaagatacttgacgcag
species | Zea mays |
transcript | GRMZM2G023715_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTTEST: gi|76291830|gb|DV031398.1|DV031398
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTTEST: gi|148981984|gb|EE028044.2|EE028044
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTTGGGTEST: gi|71768120|gb|DR966057.1|DR966057
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTT-GGGT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTTEST: gi|148981983|gb|EE028043.2|EE028043
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTTEST: gi|76291831|gb|DV031399.1|DV031399
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGAAATATCC-GGACTCTCTTGGGTEST: gi|71768121|gb|DR966058.1|DR966058
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAA-TATCCCGGACTCTCTTGGGT
EST: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTT GCTCTTCGATGGAAACAGATTCACCGGGGATATCCCGGACTCTCTTGGGTT
genomic: GGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgt ... cttgacgcagGCTCTTCGATGGAAACAGATTCACCGGGAATATCCCGGACTCTCTTGGGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCACTTCAACAAGAACCAGTTGTCTGGTCCGATCCCCGACGCTCTCTTCAGCCCGGAGATGGCCTTGATCCACTTgtgagctcgtgaaaccccccctgtttgaaggctgcttttgcaatccaccgatgtttactgacacccctaagatacttgacgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG