1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATAATAGAGACCTATGTGACTGTTGTTGTAGATTCTTCAGACCGCCTAGTGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaatatgagattagtagaatattatggaaatatttcatttatactgttctgtctttagtcaatgcatcgcttttgaatattgctgcagtgtgtc...
species | Zea mays |
transcript | GRMZM5G886044_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAG GAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTGEST: gi|76011108|gb|DT938278.1|DT938278
genomic: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaat ... tgtcacgcagGAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTG
EST: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAG GAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTTTGEST: gi|211145649|gb|FL480704.1|FL480704
genomic: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaat ... tgtcacgcagGAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTG
EST: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAG GAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTGEST: gi|213180019|gb|FM183517.1|FM183517
genomic: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaat ... tgtcacgcagGAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTG
EST: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAG GAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTGEST: gi|60355569|gb|DN222542.1|DN222542
genomic: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaat ... tgtcacgcagGAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTG
EST: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAG GAGTGCATTAGCTTGGGGAAAGAAAGGAGACGGAGCCTAAGAGAAATTTTG
genomic: TGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaat ... tgtcacgcagGAGTGCATTAGCTTGGCGAAAGAAAGGAGACGGAGCCTAAGAGAAATTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATAATAGAGACCTATGTGACTGTTGTTGTAGATTCTTCAGACCGCCTAGTGTCATTACAAAAACTTGGAGGTGCAGTGACATGCATGGCGACTATTAAGgttagttaatatgagattagtagaatattatggaaatatttcatttatactgttctgtctttagtcaatgcatcgcttttgaatattgctgcagtgtgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG