1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TAGAGCTAATGGAGATGGAACAAGGAAGACAAGGACACGGGACCGGCCTAGGGCTGTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGATgtacattcctatatttatttgagttacttagcagttcattggcatgaactcgtttgcatatactgtgttgcgtatcatctggaagggtgccaaatcttgtctcttggctaacacaattcttcatcttttctctcttatctacag
species | Zea mays |
transcript | GRMZM5G873277_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGAT AAAAGAAGGTTAATAACTCATGCAAATGCGAAGAGCAAGAGTGAAAAGTTCEST: gi|37399705|gb|CF637186.1|CF637186
genomic: GTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGATgtacattcct ... ttatctacagAAAAGAAGGTTAATAACTCATGCAAATGCGAAGAGCAAGAGTGAAAAGTTC
EST: GGGCTGTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGAT AAAAGAAGGTTAATAACTCATGCAAATGCGAAGAGCAAGAGTGAAAAGTTC
genomic: GGGCTGTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGATgtacattcct ... ttatctacagAAAAGAAGGTTAATAACTCATGCAAATGCGAAGAGCAAGAGTGAAAAGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAGCTAATGGAGATGGAACAAGGAAGACAAGGACACGGGACCGGCCTAGGGCTGTTCCAGCTCCAGAGGCAAACGCCGAACTGCAAGCAAATATTGATgtacattcctatatttatttgagttacttagcagttcattggcatgaactcgtttgcatatactgtgttgcgtatcatctggaagggtgccaaatcttgtctcttggctaacacaattcttcatcttttctctcttatctacag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA