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TTGTAGCATTTGATGGCAAAACGCAAACCTTAAAGACTTCATCGGGGAAAGTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaactacacttatgcgaatgaggtgcatttaaatgtatgggaaaccatatttctgatgtcattatcatcatgtccatttttcttaaactttttct...
species | Zea mays |
transcript | GRMZM5G828229_T02 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|31353724|gb|CD438081.1|CD438081
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|148931941|gb|EC875173.2|EC875173
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAGAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|148933346|gb|EC877008.2|EC877008
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|149075601|gb|EE164139.2|EE164139
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|148959619|gb|EC905559.2|EC905559
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAAT-ACCTGGAGTTCACTACATACGGGAEST: gi|19436377|gb|BM952787.1|BM952787
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|18660451|gb|BM500869.1|BM500869
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|211294189|gb|FL028349.1|FL028349
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: TATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|71439564|gb|DR820614.1|DR820614
genomic: TATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: TATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|148995891|gb|EE035131.2|EE035131
genomic: TATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|213168062|gb|FM185604.1|FM185604
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|148990927|gb|EE032350.2|EE032350
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGAEST: gi|7242278|gb|AW574464.1|AW574464
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
EST: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAG ATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
genomic: GTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaact ... tttttttcagATTACCTGAGAAAATTGGAGGGAAATTACCTGGAGTTCACTACATACGGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGTAGCATTTGATGGCAAAACGCAAACCTTAAAGACTTCATCGGGGAAAGTTCTGAAATACGGCTCACTTATTATTTCTACTGGATGTGAAGCATCGAGgtatacaactacacttatgcgaatgaggtgcatttaaatgtatgggaaaccatatttctgatgtcattatcatcatgtccatttttcttaaactttttct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC