1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTATCGAGACTGGGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATAgttaatcacttgcaaatgcttatacagcctcttgttattttgtagtgttgttttcttatctttttcttatgttccggtgtggaactaccctag
species | Zea mays |
transcript | GRMZM2G573867_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATA GTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATAEST: gi|7031240|gb|AW461128.1|AW461128
genomic: GGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATAgttaatcact ... actaccctagGTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATA
EST: GACTGGATATGGAGCATGGCTCCATGGGGAAGGCTGTCGCAACTGGAATA GTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATAEST: gi|32849355|gb|CD989036.1|CD989036
genomic: GACTGGATATGGAGCATGGCTCCATGGGGA-GGCTGTCGCAACTGGAATAgttaatcact ... actaccctagGTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATA
EST: GGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATA GTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATA
genomic: GGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATAgttaatcact ... actaccctagGTTATGGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTATCGAGACTGGGACTGGATATGGAGCATGGCTCCATGGGGAGGCTGTCGCAACTGGAATAgttaatcacttgcaaatgcttatacagcctcttgttattttgtagtgttgttttcttatctttttcttatgttccggtgtggaactaccctag
- - - - - - - - - - - - GGAGCA