1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATTGGCTGATACTCCAGGTATTAAAAGAGGCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattttatttggagagtttttggactaggtttttccccttaggatttccaattctccagggtttcattcaaatattctcttgctaatcattgtta...
species | Zea mays |
transcript | GRMZM2G531738_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAG GATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTGEST: gi|87155947|gb|DY400736.1|DY400736
genomic: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattt ... gttcttttagGATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTG
EST: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAG GATGCATACTTCAEST: gi|33090892|gb|CF050886.1|CF050886
genomic: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattt ... gttcttttagGATGCATACTTCA
EST: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAG GATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTGEST: gi|31351357|gb|CD435714.1|CD435714
genomic: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattt ... gttcttttagGATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTG
EST: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAG GATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAG-ATTGEST: gi|31352540|gb|CD436897.1|CD436897
genomic: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattt ... gttcttttagGATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTG
EST: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAG GATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTG
genomic: GCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattt ... gttcttttagGATGCATACTTCATGAGCCCAGCAAGCAGAGCTTTTGATGCCTTAGGATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGGCTGATACTCCAGGTATTAAAAGAGGCTTAGAATCTCCTTCTGCCTGGAAGTCTCCTGTGTTCACACCATTCCAGgtaattattttatttggagagtttttggactaggtttttccccttaggatttccaattctccagggtttcattcaaatattctcttgctaatcattgtta
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