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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc

Basic information

species Zea mays
transcript GRMZM2G407044_T02
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|149075260|gb|EE163764.2|EE163764
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|149075260|gb|EE163764.2|EE163764
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|149087824|gb|EE177122.2|EE177122
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         GTTTCTGGCGATTTTCTGCTGCTTCTTACCCAGACCTGATAGATGCGTTGC
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... cGTTTCTGGCGATTTTCTGCTGCTTCTTACCCAGACCTGATAGATGCGTTGCCGAAAAATCCACTTACAT
EST: gi|33098451|gb|CF058411.1|CF058411
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|33098451|gb|CF058411.1|CF058411
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|78122764|gb|DV541148.1|DV541148
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|78122764|gb|DV541148.1|DV541148
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|71435773|gb|DR816823.1|DR816823
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|71435773|gb|DR816823.1|DR816823
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|148949305|gb|EC894756.2|EC894756
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA
EST: gi|148949305|gb|EC894756.2|EC894756
EST:     ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCC                         C
genomic: ATTGCTTTGAGACGTGAAAGGATTGGTGCAACAGCCc ... c-c ... cGTTTCTGGCGA