1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CTGCAGCCACCATGGAACAATGCATATAAAAGGGAATCGCCAATATTCATGTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgttttacttagttcctttctttgtgttgttaaatgccaactaaaaggttgtagttgttaacatgggatatagaacccacaagtagtcgtcaccatt...
species | Zea mays |
transcript | GRMZM2G402653_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATAEST: gi|89106829|gb|DY577046.1|DY577046
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATAEST: gi|26558474|gb|CA830709.1|CA830709
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATAEST: gi|22546239|gb|BU098550.1|BU098550
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATAEST: gi|89106844|gb|DY577061.1|DY577061
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATAEST: gi|22472628|gb|BU037108.1|BU037108
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
EST: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTA GTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
genomic: GTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgtttta ... tggtccacagGTACAAGGCTTTGTAGAGGACAACAATGGGAACAAAGCTTCGTTTTTGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCAGCCACCATGGAACAATGCATATAAAAGGGAATCGCCAATATTCATGTAAACTGAAGTTCAAAGAGCCATCACTTCTTGACCGGAATCCCCATCTAgtatgttttacttagttcctttctttgtgttgttaaatgccaactaaaaggttgtagttgttaacatgggatatagaacccacaagtagtcgtcaccatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG