1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATTATGGTATTGATTTTGATGGTGATAAGCATCCTGTCAAATCATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttcttcctctggctgctcccaagccttcctttgatgatcgtaggttcattcagtgctgcattctgcgagttttcttctcaagtttcctttgaatgcgttttgcag
species | Zea mays |
transcript | GRMZM2G357972_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGTEST: gi|71766444|gb|DR964381.1|DR964381
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGTEST: gi|32796222|gb|CD948458.1|CD948458
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGCAAGCAGCGATEST: gi|166553572|gb|EG289391.1|EG289391
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCEST: gi|5915516|gb|AW053157.1|AW053157
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGC
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGTEST: gi|12968346|gb|BG265292.1|BG265292
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
EST: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGA GGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
genomic: ATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttctt ... cgttttgcagGGACGCGAGGCAAAGCTGCTTCGAAGTGAAGTGTTGACTGAAAGCAGCGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTATGGTATTGATTTTGATGGTGATAAGCATCCTGTCAAATCATTTGAATGCCTGTGCGGAAGCAGATACTGCCGTGGTAGAAAGCATTCGAgtatgttcttcctctggctgctcccaagccttcctttgatgatcgtaggttcattcagtgctgcattctgcgagttttcttctcaagtttcctttgaatgcgttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT