Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggttcctgttggctttaacaaaacggaacattcgcatggtttcag

Basic information

species Zea mays
transcript GRMZM2G165998_T01
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: LOC_Os03g06620.1 (Oryza sativa), 5'ss of exon 6
GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggttcctgttggctttaacaaaacggaacattcgcatggtttcag
|||||||| || |||||||| |||||||||||||| || ||||| ||||| ||||||||||| || |||||||||                       |||  ||            || ||| || |  | || |  ||    ||||| ||||            || || ||||  ||||| ||       |  |||   || ||||  ||||||
GCAATGCGGCTCTTTGTGGGAGAGCCTGTCTGGACGCCGTACAACCGTCCCCATGACCATCTGCCAGCTAGgtat-----------------------ctgttct------------ttctgttccttgttttcctcttta---tctctggcttat----------ttttccggttattgttgactc------agtggaggttttgcataatttcag

upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA20G28860.1 (Glycine max), 5'ss of exon 6
GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcg---tctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttc-cactttcgttattctctggttcctgttggctttaacaaaacggaacattcgcatggtttcag
||  ||||| | ||||| |||||||| || ||||| ||||||||||||||  ||||||||||||| || ||||||||          |||   | || || | |     ||  | ||  |  |  |  | |||  || |  |   ||  | ||  | | ||                                                            
GCTTTGCGTTTTTTTGTTGGTGAGCCAGTTTGGACTCCATACAATCGTCCAAATGACCATCTCCCTGCAAGgtatgaattaataaattctattgtcttaaacag--tcactcaatcagag--gcttttctttcaatcctcataaaatgatttcaatgcgcag-----------------------------------------------------------

upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: AT4G14710.1 (Arabidopsis thaliana), 5'ss of exon 6
GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggt-tcctgttggctttaacaaaacggaacattcgcatggtttcag
|||||||| || || |||||||| || |||||||||||||||||||| || || ||||| ||||| || |||||  ||  |  || |    | |     ||         |   ||  | ||   ||     || | |  | |    | ||     |     | | ||    | | ||     |||| |   | |                       
GCAATGCGGCTTTTCGTGGGTGAACCGGTCTGGACACCATACAATCGCCCACACGACCACCTCCCTGCAAGgtacaatgttctgttttcccctt----ttgtctcatcaaaaacttactctg---caaaagttcatccaagaaaagacacgagaaaa-----gctgtttatggatatcgaaacggctattttacag----------------------

upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: AT4G14710.3 (Arabidopsis thaliana), 5'ss of exon 6
---GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggt-tcctgttggctttaacaaaacggaacattcgcatggtttcag
   |||||||| || || |||||||| || |||||||||||||||||||| || || ||||| ||||| || |||||  ||  |  || |    | |     ||         |   ||  | ||   ||     || | |  | |    | ||     |     | | ||    | | ||     |||| |   | |                       
CAGGCAATGCGGCTTTTCGTGGGTGAACCGGTCTGGACACCATACAATCGCCCACACGACCACCTCCCTGCAAGgtacaatgttctgttttcccctt----ttgtctcatcaaaaacttactctg---caaaagttcatccaagaaaagacacgagaaaa-----gctgtttatggatatcgaaacggctattttacag----------------------

upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: AT4G14716.1 (Arabidopsis thaliana), 5'ss of exon 6
GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgat--cctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggttcctgttggctttaacaaaacggaacattcgcatggtttcag
|||||||| ||||| |||||||| || || ||||||||||||||||| || || |||||||| || || |||||  ||  |||| || |    | |     ||  ||  |     |    || |    ||  ||          ||||| |   ||  ||      ||   |||| |   |    |                                 
GCAATGCGGCTATTCGTGGGTGAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtcctgggttttccccttttgtttgttctcttatgcaaacaatgggatatataatcaagcaag-aaattctgttatttt-acgagaaataaattctgatattttacag---------------------------------

upper sequence: GRMZM2G165998_T01 (Zea mays), 5'ss of exon 6
lower sequence: AT4G14710.4 (Arabidopsis thaliana), 5'ss of exon 6
GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcctgcgtctgaagcctaaagctggactgctggagcattgttgtgtcccattctctctttcttggattctctcgcttccactttcgttattctctggttcctgttggctttaacaaaacggaacattcgcatggtttcag
|||||||| || || |||||||| || |||||||||||||||||||| || || ||||| ||||| || |||||  ||  |  || |    | |     ||         |   ||  | ||   ||     || | |  | |    | ||     |  |   |     | | |   | | |   ||| |||  |  |                   
GCAATGCGGCTTTTCGTGGGTGAACCGGTCTGGACACCATACAATCGCCCACACGACCACCTCCCTGCAAGgtacaatgttctgttttcccctt----ttgtctcatcaaaaacttactctg---caaaagttcatccaagaaaagacacgagaaaagctgtttatggatatcgaaacggcta--ttttacaggaaag-------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33094404|gb|CF054398.1|CF054398
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|28910026|gb|CB331220.1|CB331220
EST:     AGCCTGTCTGGACACCATACAATCGTCCGCATGACCATC-CGCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAA
genomic: AGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTC-CCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAA
EST: gi|32867089|gb|CF006771.1|CF006771
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211399849|gb|FL464333.1|FL464333
EST:     GAGCCTGTCTGGACCCCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32859466|gb|CD999147.1|CD999147
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|38502592|gb|CF972452.1|CF972452
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32867384|gb|CF007066.1|CF007066
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|15426654|gb|BI542476.1|BI542476
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCG
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCG
EST: gi|31250447|gb|CD219471.1|CD219471
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTC
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTC
EST: gi|32800716|gb|CD952952.1|CD952952
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32866798|gb|CF006480.1|CF006480
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32919131|gb|CF023943.1|CF023943
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|16925052|gb|BM078120.1|BM078120
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|5740388|gb|AI948078.1|AI948078
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32797455|gb|CD949691.1|CD949691
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32945818|gb|CF050637.1|CF050637
EST:     CACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAACCGTCGA
genomic: CACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|116814797|gb|EC857413.1|EC857413
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAAATCATCAACCGAGGTGGAAACCAAGCCGTCG
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAG-AAAATCATCAACCGAGGTGGAAACCAAGCCGTCG
EST: gi|5757413|gb|AI964700.1|AI964700
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|21626162|gb|BQ621083.1|BQ621083
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32810201|gb|CD962435.1|CD962435
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCAGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33091913|gb|CF051907.1|CF051907
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800063|gb|CD952299.1|CD952299
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32944643|gb|CF049462.1|CF049462
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800619|gb|CD952855.1|CD952855
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|31558578|gb|CD527790.1|CD527790
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32797850|gb|CD950086.1|CD950086
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|74238453|gb|DT646367.1|DT646367
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211135336|gb|FL235024.1|FL235024
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAA-CCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|4730364|gb|AI649530.1|AI649530
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32788894|gb|CD941130.1|CD941130
EST:     GAGCCTGTCGGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33102636|gb|CF062596.1|CF062596
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32909905|gb|CF014717.1|CF014717
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32804828|gb|CD957064.1|CD957064
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAGACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32858434|gb|CD998115.1|CD998115
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800561|gb|CD952797.1|CD952797
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGAGAA-CCAAGTCCGTC
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTG-GAAACCAAG-CCGTC
EST: gi|71442963|gb|DR824013.1|DR824013
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAA-CCAAGCCGTC
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTC
EST: gi|37361130|gb|CF602419.1|CF602419
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|76292804|gb|DV032372.1|DV032372
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|5650336|gb|AI920696.1|AI920696
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211135334|gb|FL235022.1|FL235022
EST:     GAGCCTGTCTGGACAC-ATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAA-TCATCAACCGAGGTGAAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33104243|gb|CF064203.1|CF064203
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33098473|gb|CF058433.1|CF058433
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32931870|gb|CF036682.1|CF036682
EST:     GAGCCTGTCTGGACACCACACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|74242695|gb|DT650609.1|DT650609
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32790581|gb|CD942817.1|CD942817
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32910751|gb|CF015563.1|CF015563
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32919375|gb|CF024187.1|CF024187
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTG
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTG
EST: gi|61236444|gb|DN586197.1|DN586197
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGGAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|10697509|gb|BE997233.1|BE997233
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33093895|gb|CF053889.1|CF053889
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32916976|gb|CF021788.1|CF021788
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGA
EST: gi|32800513|gb|CD952749.1|CD952749
EST:     GAGCCTGTCTGGACACCATACCATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211115612|gb|FL096561.1|FL096561
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGNTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|60353028|gb|DN220001.1|DN220001
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|14245156|gb|BG873738.1|BG873738
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|5917477|gb|AW054280.1|AW054280
EST:     GAGCCTGTCTGGACCCCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCGTCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800115|gb|CD952351.1|CD952351
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|78543835|gb|DV621333.1|DV621333
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|47961614|gb|CN844323.1|CN844323
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGT
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGT
EST: gi|211115616|gb|FL096565.1|FL096565
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32858764|gb|CD998445.1|CD998445
EST:     GAG-C---CTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800675|gb|CD952911.1|CD952911
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800515|gb|CD952751.1|CD952751
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTGG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800011|gb|CD952247.1|CD952247
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAGGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|76292805|gb|DV032373.1|DV032373
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32945164|gb|CF049983.1|CF049983
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32909904|gb|CF014716.1|CF014716
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211115618|gb|FL096567.1|FL096567
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|111433966|gb|EE298003.1|EE298003
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGGGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33096276|gb|CF056270.1|CF056270
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|14206633|gb|BG840311.1|BG840311
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|5739939|gb|AI947629.1|AI947629
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATG-CCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32800085|gb|CD952321.1|CD952321
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32916659|gb|CF021471.1|CF021471
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|51592308|gb|CV071454.1|CV071454
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|108823936|gb|EC277944.1|EC277944
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTTCGAGAAAATCATCAACCCAGGTGGAAACCAAGCCGTCG
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGT-CGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCG
EST: gi|32805477|gb|CD957711.1|CD957711
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|5597144|gb|AI891347.1|AI891347
EST:     GAGCCTGTCTGGACCCCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|111433950|gb|EE297942.1|EE297942
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32913299|gb|CF018111.1|CF018111
EST:     GAACCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|6101945|gb|AW126415.1|AW126415
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTTGAGAAAATCA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCA
EST: gi|116820267|gb|EC863478.1|EC863478
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAAACAAGC-GTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|74034932|gb|DT535422.1|DT535422
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGGGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|15426797|gb|BI542619.1|BI542619
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|44681892|gb|CK786940.1|CK786940
EST:     AGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCCTCG
genomic: AGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCC-GGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCG
EST: gi|31664049|gb|CD573229.1|CD573229
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|31910934|gb|CD651672.1|CD651672
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211115615|gb|FL096564.1|FL096564
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|33104434|gb|CF064394.1|CF064394
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|60351374|gb|DN218347.1|DN218347
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211137224|gb|FL235051.1|FL235051
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAAACAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32916074|gb|CF020886.1|CF020886
EST:     GAGCCTGTCTGGGCACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32868007|gb|CF007689.1|CF007689
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|211136271|gb|FL235033.1|FL235033
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|37400731|gb|CF637725.1|CF637725
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32790618|gb|CD942854.1|CD942854
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32823077|gb|CD962799.1|CD962799
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|44681879|gb|CK786927.1|CK786927
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
EST: gi|32823206|gb|CD962928.1|CD962928
EST:     GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAG                         GAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA
genomic: GAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 357

GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGAAGCTCGTTGAGCGTGTCCACTCTACATGTCCTCCTGCCGTCTCAGCCTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1645

GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGAAGCTCGTTGAGCGTGTCCACTCTACATGTCCTCCTGCCGTCTCAGCCTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 3579

GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGAAGCTCGTTGAGCGTGTCCACTCTACATGTCCTCCTGCCGTCTCAGCCTC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1030

GCAATGCGTCTATTTGTGGGTGAGCCTGTCTGGACACCATACAATCGTCCGCATGACCATCTCCCGGCTAGgtatgatcct ... atggtttcagGAAGGAGTACGTCGAGAAAATCATCAACCGAGGTGGAAACCAAGCCGTCGAAGCTCGTTGAGCGTGTCCACTCTACATGTCCTCCTGCCGTCTCAGCCTC