Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgttgattcctgtacttttgaattgtggggcaggactaaagtttgatcactcatattccctcag

Basic information

species Zea mays
transcript GRMZM2G158479_T04
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: LOC_Os05g23620.1 (Oryza sativa), 5'ss of exon 7
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaact--aactgtcatgttga-ttcctgtacttttgaattgtggggc--------aggactaaagtttgatcactcatattccct----cag
 |||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||  |   | ||   |||||   || |  | || |||  ||| |||         ||| |  |||  ||||   |   || | ||    |||
TTACAATCCCTACTTCCCTGGTGGTGCCATAGCTATGCCCAAGATGCTTATAGATGGAGCTGTTGAATATGAAGATGGTACTCCTGCCACTGAAGCCCAGgtaagtttctaatgcgttgttgggctcttacagttgtgacatgttgggttagcattaagggcctaagcatgattgttgtcatcctctaccacag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA16G06700.2 (Glycine max), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgta---aactaactgtc------atgttgattcctgta-cttttgaattgtggggcaggactaaagtttgatcactcatattccctcag------------
 || ||||| ||||| |||||||| || || |||||||| || |||||||||||||| ||||| || ||||| |||||||| ||||| || ||||| ||||||   || |  ||         || | | ||  |  | ||| | ||   ||||    || || | | |     ||||| ||| || |             
TTATAATCCTTACTTTCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTGGAATATGAAGATGGTACTCCTGCTACAGAAGCTCAGgtattaaatttgcttctggaggaatatggtttagtaaatcttcttaaaaatgggatttga-tagaatctag---ctcattttctcttaatgtttgttgcag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA05G07020.1 (Glycine max), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaact-gtcatgt--tgattcctgtacttttgaat-tgtggggcaggactaaagtttg-----atcactc---atattccctcag----------------
||| ||||| || || ||||| || || || || ||||| || |||||||||||||| |||||||| ||||| |||||||| ||||| || ||| | ||||||   |   | ||   |   || || | |||  | | |     |||   |    | || ||||     || |  |   ||| |   |  |                
CTATAATCCTTATTTTCCTGGCGGGGCTATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACAGAATCTCAGgtacttttgtttgttgaggaatggtttcagtaaatctcatcacatggattatctatgaactttggaagaattatacgaaataattttttggttatattttgctacag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA19G24620.2 (Glycine max), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgttgattcctgtacttttgaattgtggggcaggactaaagtttga-------tcactcatattccctcag------------
 || ||||| ||||| |||||||| || || |||||||| || |||||||||||||| ||||| || ||||| |||||||| ||||| || ||||| ||||||   ||  |||  | | ||    ||   |  | |||  |    ||  |   || || ||       |  ||||| ||   | |             
TTATAATCCTTACTTTCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTGGAATATGAAGATGGTACCCCTGCTACAGAAGCTCAGgtattatatttgtt-tctggaggaatggtttagtaaatcttcttacaa-atagaaattggaaaaaatgtagctcattttattttaatgtttgttgcag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA19G22530.2 (Glycine max), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaact-gtcatgt--tgattcctgtacttttga-attgtggggcaggactaaagtttg-----atcactca---tattccctcag----------------
||| ||||| || || |||||||| || || || ||||| || |||||||||||||| |||||||| ||||| |||||||| ||||| || ||| | ||||||   | | | ||   |   || || | |||  | | |     | |   |    | || || |     || |  ||   |||    |  |                
CTATAATCCTTATTTTCCTGGTGGGGCTATTGCTATGCCTAAAATGCTTAATGATGGCGCTGTTGAATATGAAGATGGTACCCCTGCTACAGAATCTCAGgtacctttatttgttgaggagtggtttcagtaaatctcatgacattgattatctatgaacttcggaaaaattatgcaaaatatatttttggttactttttgctacag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: AT3G27240.1 (Arabidopsis thaliana), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgttgatt-------cctgtacttttgaa--ttgtggggcaggactaa---agtttgatcactcatattc--cctcag-------
||||||||| || |||||||| || || || || |||||||| ||||| ||||||| ||||||||||||||| ||||||   || || || || || ||||| |  |  |   ||  |  | |       | |  |  |||     || |||  | |  ||     ||| | || |   | | |   | | |        
CTACAATCCTTATTTCCCTGGGGGAGCAATTGCTATGCCGAAAATGCTCAATGATGAAGCTGTTGAGTATGAAGATGGTGTCCCCGCCACAGAGGCACAGgttatttttcctccacttaaaatataagaacataaatctttatgccttatggtactgtcctttctcagtgtcatgatataaactttactttacggtgcag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: AT5G40810.2 (Arabidopsis thaliana), 5'ss of exon 5
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgt-------tgattcctgtacttttgaattgtg---gggcaggactaaagtttga-tcactcatattccctcag------------------------------
||||||||| || ||||||||||| || || || ||||| || ||||| || |||| |||||| || ||||| ||||| || |||||||| ||||| ||||| |  |  |       |       | |||     ||  |  | || |    |    |  ||    | ||| ||| | ||||   ||                                 
CTACAATCCTTATTTCCCTGGTGGAGCAATCGCTATGCCAAAAATGCTCAACGATGAAGCTGTGGAATATGAAGATGGAACTCCTGCAACAGAAGCACAGgttagttttcctctgcttaagaaaataatttgcagaccataaagttttatcagatttgacctttcctctgagtcaattatataatctttaatttttctttttttaaaaaacatgatgcag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: Vv14s0171g00330.t01 (Vitis vinifera), 5'ss of exon 6
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaacta------actgtcatgttgattcctgtacttttgaattgtggg-gcaggact---aaagt-ttgatcactcatattccctcag--------------
||||||||| ||||||||||| ||||| || || ||||| || ||||| | |||||| ||  |||||||||| |||||||| |||||||| || || |||||    |       ||| | ||    | |   || ||| | || |||    |||    |   || || ||    | |    |  | ||                
CTACAATCCTTACTTCCCTGGGGGTGCAATTGCTATGCCTAAAATGCTCATTGATGGTGCACTTGAGTATGAAGATGGTACGCCTGCAACAGAGGCTCAGgtgggttttcatctactctaattgcaacttgggtgcttcttaactgtaattgcatctttttcaaggtgttagaaaattgagtgtcttccataattctggtgcag

upper sequence: GRMZM2G158479_T02 (Zea mays), 5'ss of exon 6
lower sequence: Vv09s0002g05950.t01 (Vitis vinifera), 5'ss of exon 5
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgttgattcctgtacttttgaa----ttgtggggcaggact--aaagtttgat-cactcatattccctcag------
||| ||||| || ||||||||||| || ||||| ||||| || ||||| |  ||||| |||||||||||||| |||||||| ||||| || ||||| || |||| |   ||||  | |  ||   | |  ||||| |    |  |   | |||  |  |||   ||||   ||||| ||  |   |      
CTATAATCCTTATTTCCCTGGTGGGGCAATAGCTATGCCCAAAATGCTCATCGATGGTGCTGTTGAGTATGAAGATGGTACCCCTGCCACAGAAGCACAAgtaa-catcctgtgctttcaatgtattttattttgcaaatttcatactgaaggtatggaaaaactgatattctcatcttaacgttggcacag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31356708|gb|CD441065.1|CD441065
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|14244836|gb|BG842774.2|BG842774
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|67028963|gb|CO457712.1|CO457712
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAA                         ATGGGGTAAG-ATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGAT
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGG-TAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGAT
EST: gi|16379087|gb|BI992745.1|BI992745
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|5055406|gb|AI734293.1|AI734293
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|15323508|gb|BI478611.1|BI478611
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|60338899|gb|DN205872.1|DN205872
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|211036752|gb|FL261404.1|FL261404
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|74245922|gb|DT653836.1|DT653836
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|91054777|gb|EB165195.1|EB165195
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|76283401|gb|DV022969.1|DV022969
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|16919521|gb|BM074230.1|BM074230
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|15590213|gb|BI674829.1|BI674829
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|31356905|gb|CD441262.1|CD441262
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|60396397|gb|DN229266.1|DN229266
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|14243082|gb|BG840790.2|BG840790
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|149097934|gb|EE183875.2|EE183875
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|6012601|gb|AW062038.1|AW062038
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|31354314|gb|CD438671.1|CD438671
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|18163834|gb|BM333673.1|BM333673
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|78075104|gb|DV503538.1|DV503538
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|40303643|gb|CK348030.1|CK348030
EST:     ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: ATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
EST: gi|211323658|gb|FL286664.1|FL286664
EST:     TGATGGAGCTGTTGAGTATGGAGGATGGTACACCTGCGACTGAAGCCCAG                         ATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG
genomic: TGATGGAGCTGTTGAGTATG-AGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaac ... attccctcagATGGGTAAGGATGTCGTATCATTCCTTTCGTGGGCAGCTGAGCCTGAGATG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTACAATCCCTACTTCCCTGGTGGTGCCATAGCCATGCCGAAGATGCTTAATGATGGAGCTGTTGAGTATGAGGATGGTACACCTGCAACTGAAGCCCAGgtaaactaactgtcatgttgattcctgtacttttgaattgtggggcaggactaaagtttgatcactcatattccctcag

- - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC