1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GAAGAAATTGAGAAGGAACTTGTTTCAACTGGGTTGTCATCTGAAGCTGTACAGGGTATCATCGATGTGCTTTCAATCAAGTCATTGTCCAAACTTGAAGgttttctcttaaccttttgttgttggcttgttattatgcatgctccatatcacataactttacttcaatattgtactgatgtaatgttgctaaattggaa...
species | Zea mays |
transcript | GRMZM2G158228_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATGTGCTTCCAATCAAGTCTTTGTCCAAAAC-TGAAAG AGGTGTTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAACTCTTCEST: gi|33091456|gb|CF051450.1|CF051450
genomic: ATGTGCTTTCAATCAAGTCATTGTCC-AAACTTG-AAGgttttctctt ... acatatgcagAGGTGTTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAACTCTTC
EST: ACAGGGTATCATCGATGTGCTTTCGATCAAGTCATTGTCCAAACTTGAAG AGGTGTTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAACTCTTCT
genomic: ACAGGGTATCATCGATGTGCTTTCAATCAAGTCATTGTCCAAACTTGAAGgttttctctt ... acatatgcagAGGTGTTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAACTCTTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGAAATTGAGAAGGAACTTGTTTCAACTGGGTTGTCATCTGAAGCTGTACAGGGTATCATCGATGTGCTTTCAATCAAGTCATTGTCCAAACTTGAAGgttttctcttaaccttttgttgttggcttgttattatgcatgctccatatcacataactttacttcaatattgtactgatgtaatgttgctaaattggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG