1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTGATCCATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaatgcaagtcctgtagcttttctacagatagtatcatatttttggacgatgtagtactaattgatgaaagttgggcaggagtaaataacaatc...
species | Zea mays |
transcript | GRMZM2G151916_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CATTGACTCACCAAGTGAAGATATGTGATTTCGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|60398307|gb|DN231123.1|DN231123
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|211015494|gb|FL335940.1|FL335940
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTCGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|211033507|gb|FL333369.1|FL333369
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|91875587|gb|EB405544.1|EB405544
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|32845700|gb|CD985381.1|CD985381
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTCGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCTEST: gi|211159258|gb|FL355922.1|FL355922
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
EST: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTG GTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
genomic: CATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaat ... atttgatcagGTCAAAGGTGAAGCAAACATTTCATATATATGCTCACGTTATTACCGTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGATCCATTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATGTTGgtaagttaatgcaagtcctgtagcttttctacagatagtatcatatttttggacgatgtagtactaattgatgaaagttgggcaggagtaaataacaatc
- - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aataacaa