1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATCAGATTGTTAGTGGTCATACTCTTAAGCATCTATGTGCTGCGATGGTACCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttctagactgcttgttgaagaacaaaccttgatcggtccatcaatagggatgtgcatttttttttgttgcatccatattgccatattggttgct...
species | Zea mays |
transcript | GRMZM2G147709_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAG GATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAGEST: gi|91868409|gb|EB400024.1|EB400024
genomic: CGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttct ... tgtcatgcagGATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
EST: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAG GATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAGEST: gi|67012775|gb|CO441524.1|CO441524
genomic: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttct ... tgtcatgcagGATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
EST: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAG GATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAGEST: gi|211335488|gb|FL454133.1|FL454133
genomic: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttct ... tgtcatgcagGATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
EST: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAG GATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAGEST: gi|6696044|gb|AW289152.1|AW289152
genomic: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttct ... tgtcatgcagGATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
EST: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAG GATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
genomic: CCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttct ... tgtcatgcagGATAAGCTTGCTCCAGAAGTGGAAGACCAGTTGGGTTGCGGTGAGAGAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAGATTGTTAGTGGTCATACTCTTAAGCATCTATGTGCTGCGATGGTACCGGTTTTCCTGGCTCTCATGCTAGCTAAAAGGACTACCGAACCAGAAAGgttagcttctagactgcttgttgaagaacaaaccttgatcggtccatcaatagggatgtgcatttttttttgttgcatccatattgccatattggttgct
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