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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTAGAGACAACTCGCCATGTGTCGATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaaaacctgtcctctcgctacaaacacagaagaattttacagttgatagctttttccttccctaattcgtaaattgctgttcactgttttcagcttgcctgctcattattggttatgtttgatattgtacttag

Basic information

species Zea mays
transcript GRMZM2G146472_T02
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32830032|gb|CD969710.1|CD969710
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAAC-TGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|28930818|gb|CB334179.1|CB334179
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31363344|gb|CD447701.1|CD447701
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32829230|gb|CD968908.1|CD968908
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAG
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAG
EST: gi|15214979|gb|BI431119.1|BI431119
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|22542105|gb|BU092543.1|BU092543
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32841469|gb|CD981150.1|CD981150
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|19822219|gb|BQ048243.1|BQ048243
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32839778|gb|CD979459.1|CD979459
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|76930615|gb|DV172453.1|DV172453
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|24773481|gb|CA408735.1|CA408735
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32831818|gb|CD971496.1|CD971496
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|149101883|gb|EE187954.2|EE187954
EST:     CAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: CAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32828756|gb|CD968434.1|CD968434
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAAC-TGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|24774011|gb|CA409265.1|CA409265
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|76918295|gb|DV167234.1|DV167234
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|56462114|gb|CK986412.1|CK986412
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAACTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31356464|gb|CD440821.1|CD440821
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|4753393|gb|AI657303.1|AI657303
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|60345407|gb|DN212380.1|DN212380
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31359395|gb|CD443752.1|CD443752
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|148933612|gb|EC877493.2|EC877493
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|24774111|gb|CA409365.1|CA409365
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|67031337|gb|CO460086.1|CO460086
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|14202293|gb|BG835970.1|BG835970
EST:     ATGATAACTGT-AAACTGTCAAAGAACCCTCTGGATACATCATCTCCARG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|24961547|gb|CA483556.1|CA483556
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31363502|gb|CD447859.1|CD447859
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31354397|gb|CD438754.1|CD438754
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|166698581|gb|EG294767.1|EG294767
EST:     TCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: TCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|24773581|gb|CA408835.1|CA408835
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|29577050|gb|CB617162.1|CB617162
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|149078577|gb|EE167361.2|EE167361
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|148939817|gb|EC884519.2|EC884519
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|211501106|gb|FL128526.1|FL128526
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32829344|gb|CD969022.1|CD969022
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|60344926|gb|DN211899.1|DN211899
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32839644|gb|CD979325.1|CD979325
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAAC-TNNGCTTTTGACTAT
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCT--GCTTTTGACTAT
EST: gi|32839779|gb|CD979460.1|CD979460
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32839620|gb|CD979301.1|CD979301
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|148942045|gb|EC887040.2|EC887040
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|31364520|gb|CD448875.1|CD448875
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32839780|gb|CD979461.1|CD979461
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|149101884|gb|EE287439.2|EE287439
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
EST: gi|32839645|gb|CD979326.1|CD979326
EST:     ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGG                         ATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA
genomic: ATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaa ... ttgtacttagATACCAGCCACCTATCCCAGCTGAAGAGGTGAAACCTGCTTTTGACTATGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACTAGAGACAACTCGCCATGTGTCGATGATCACTGTGACACTGTCAAAGAACCCTCTGGATACATCATCTCCAGGgtaagtcaaaaacctgtcctctcgctacaaacacagaagaattttacagttgatagctttttccttccctaattcgtaaattgctgttcactgttttcagcttgcctgctcattattggttatgtttgatattgtacttag

- - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - AAGAAC