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GTGTTAATGCGGATATACATGTCATTCCAAAAATTGAAAGTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcattgatgatggccatgcaatcctttgataccaaaagatgtaaattcgtagaaagggaaaggacttgtaatggtaaaatgagtgtagactttt...
species | Zea mays |
transcript | GRMZM2G144730_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|71764041|gb|DR961978.1|DR961978
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|7238117|gb|AW573339.1|AW573339
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GCTGCTTCAGATGGG GCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|26456209|gb|CA827792.1|CA827792
genomic: GCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCGCGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|32935309|gb|CF040121.1|CF040121
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|78075400|gb|DV503834.1|DV503834
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTTEST: gi|20301238|gb|BQ164181.1|BQ164181
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
EST: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGG GCAATGGTGGCGCGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
genomic: GTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcat ... atcttttcagGCAATGGTGGCACGTGGAGACCTTGGTGCTGAACTTCCGATTGAGGATGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTTAATGCGGATATACATGTCATTCCAAAAATTGAAAGTGCAGACTCAATACCAAATCTGCAGTCCATTATTGCTGCTTCAGATGGGgtaagatcattgatgatggccatgcaatcctttgataccaaaagatgtaaattcgtagaaagggaaaggacttgtaatggtaaaatgagtgtagactttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaatgag