1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TATTCCAAACTACAATCCAAGAGACATTCTTGCTAACCTCAGGCGATTGCTGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtattatgaattggcttttgcagttgcaccaaggcatggttttgtaaatactactacctccgttctcgaatatttgttgcccgctagttcatttttgaactaaaccacgacaaataaaaaagaatggagggagtactatataaactattggttgtactaaagcaaactttatatgcccaaatttacag
species | Zea mays |
transcript | GRMZM2G121210_T02 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAG GGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACTEST: gi|211094716|gb|FL034688.1|FL034688
genomic: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtatta ... aaatttacagGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
EST: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAG GGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACTEST: gi|211094715|gb|FL034687.1|FL034687
genomic: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtatta ... aaatttacagGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
EST: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAG GGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACTEST: gi|211097188|gb|FL034700.1|FL034700
genomic: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtatta ... aaatttacagGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
EST: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAG GGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACTEST: gi|31558543|gb|CD527755.1|CD527755
genomic: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtatta ... aaatttacagGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
EST: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAG GGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
genomic: TGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtatta ... aaatttacagGGCTCTATAGAGAAGACAGTCAATACAAAGGTAGCTGGTTCCACATATACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTCCAAACTACAATCCAAGAGACATTCTTGCTAACCTCAGGCGATTGCTGAATGGAGAGTCTACTGTACCAATGCACCCATGGTACAGGGGATTTAAGgttagtattatgaattggcttttgcagttgcaccaaggcatggttttgtaaatactactacctccgttctcgaatatttgttgcccgctagttcatttttgaactaaaccacgacaaataaaaaagaatggagggagtactatataaactattggttgtactaaagcaaactttatatgcccaaatttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA