1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TATGTTTCAGGGCTATGATATCAGTTTCCTGATAACAAACTACCATTGTGAGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAGgtaagttcatacgcataagcataggcatggctttgagtttgtcgcttgttctcttttggtcgatagatgcaacgttgtttgtatgttggcagcgtactcacactattctgcttacatgaaccccag
species | Zea mays |
transcript | GRMZM2G112015_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAG GATATTGACAAGGAGATCAGCGAGCTGAAGCTGTCAGTAAACACTCGTGGCEST: gi|18172579|gb|BM347967.1|BM347967
genomic: AGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAGgtaagttcat ... tgaaccccagGATATTGACAAGGAGATCAGCGAGCTGAAGCTGTCAGTAAACACTCGTGGC
EST: AGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAG GATATTGACAAGGAGATCAGCGAGCTGAAGCTGTCAGTAAACACTCGTGGC
genomic: AGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAGgtaagttcat ... tgaaccccagGATATTGACAAGGAGATCAGCGAGCTGAAGCTGTCAGTAAACACTCGTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGTTTCAGGGCTATGATATCAGTTTCCTGATAACAAACTACCATTGTGAGGACATGCATAAGCACAAGCTCATAGATTTCATCGTGCAATTTATGGAGgtaagttcatacgcataagcataggcatggctttgagtttgtcgcttgttctcttttggtcgatagatgcaacgttgtttgtatgttggcagcgtactcacactattctgcttacatgaaccccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA