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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctgttatacctgttgattttacatggctactgctgctgacagggcgcttaatcttttgcccttgcag

Basic information

species Zea mays
transcript GRMZM2G107362_T03
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: LOC_Os02g11050.1 (Oryza sativa), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctg--ttatacctgttgattttac-atggctactgctgctgacagggcgcttaatcttttgcccttgcag
||| |||||||||| || || |||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||| ||   | ||||| |   |   || |   |||| ||||| | |||  | ||  || |||    ||||||| ||||||||  |     
GTTCTGATGGCAACAAATAGGATAGACATCTTGGATCAGGCCCTTCTGAGGCCTGGTCGCATAGACAGGAAAATTGAATTTCCTAATCCTAATGAGGATgtaagtgctgataacttactgtatattgtttgtgttaatttttccatgatttcttgtgttgatgatgcgctta-tcttttgctttcag--

upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: GLYMA07G00420.1 (Glycine max), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatg---tttggctaactcat--cctgttatacctgttgattttacatggctactgctgctgacagggcgcttaatcttttgcccttgcag-------------------
||||||||||| || ||  | || || ||  ||||||||||||| || || || || || |||||| |||| |||||||||||||| ||||| || || || ||   ||| |||  |      ||  |||      |||   |   |       |||  |||   |    | |||     |   | || |                    
GTTTTGATGGCCACCAATCGGATTGATATCCTGGATCAAGCCCTCCTTAGACCAGGACGGATAGACCGGAAAATTGAATTTCCAAACCCTAATGAAGAGgtttgcatttttgctttcatgctacccattaatatatttgtactgggagaaaagatgcacctggt-gcattcataaaaaaatattcctgaaaatgagtattttttatgcag

upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: GLYMA08G24000.1 (Glycine max), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctgttatacctgttgattttacatggctactgctgctgacagg-gcgcttaatcttttgcccttgcag-------------------------------
||||||||||| || ||  | || || ||  ||||||||||||| || || ||||| || || ||| ||||||||||||||||||| ||||| || || || ||        | |  | || | || |   ||  |  || ||   |||||      | ||  || | |  |   || |      ||                               
GTTTTGATGGCCACAAATCGGATTGATATCCTGGATCAAGCCCTCCTTAGACCTGGACGGATTGACCGGAAGATTGAATTTCCAAACCCTAATGAAGAGgtttgc-------atttttgctttcatgctacttattaatatatttgtactgggagaaaaagatgcacctggtgcattcctaaaaaagtattcctgaaaatggctatttatttatgcag

upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: AT5G19990.1 (Arabidopsis thaliana), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgta-tgtttg-gctaactcatcctgttat-acctgttgatttt----acatggctac--tgctgctgacagggcgcttaatcttttgcccttgcag-----------------------------------------------------------------------------------------------------
||||||||||| || ||  | || || ||| |||||||||| ||||| ||||||||  | || || ||||| ||||||||||| |||||||| || || ||| |  ||| |||     |   || |||   |||||| ||||    | |||  |||  |  |  | | ||   ||    | ||| |   ||  |                                                                                                      
GTTTTGATGGCTACAAATCGTATTGATATTCTGGATCAAGCTCTTCTCAGGCCTGGAAGAATTGATAGGAAAATTGAATTTCCTAATCCTAATGAAGAGgtaatacttgtgctctgagaaaatgatattgactgttgtttttggtgatatgaatacattattcgtcaaagtaggcaccttatttagtatttagactatcatttgcagcataaaaaacttttctttatctccatactcattttactcaagtgaggcaggacggtttggctaatgtatgtttccaaaatgtgttgcag

upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: Vv09s0002g05800.t01 (Vitis vinifera), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctgttatacctgttg--attttacatggct---actgctgctgacagggcgcttaatcttttgcccttgcag-----------
||||| ||||| || ||  |||| || ||| | || |||||||| || ||||| || || || |||||||||||||| ||||||||||| || | ||| ||| || |     |||  | |||| | | ||  ||  |  |||||   |    |   | | |    || |   |   || || ||||||||            
GTTTTAATGGCTACAAATCGAATTGATATTCTTGACCAAGCCCTCCTCAGGCCAGGACGGATTGACAGGAAGATTGAGTTTCCAAATCCCAATGGGGAGgta-gtatact--acttttactgtgaaatcttctgcaaccttacaatacataaaaaacggttctttggtctgctttcctctttcccttgcatgttcttgtgca

upper sequence: GRMZM2G107362_T04 (Zea mays), 5'ss of exon 7
lower sequence: Vv04s0008g04690.t01 (Vitis vinifera), 5'ss of exon 7
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctgttatacctgttgattttacatggctactgctgctgacagggc--gcttaatcttttgcccttgcag--------------
||||||||||| || ||  | || || ||||||||||||||||| || |||||||| || || |||||||||||||| || |||||||| ||||| || |||| |||  ||   | | | | ||  |  |  ||   ||||  |   |    |     |||  |  | ||  | ||   |   |                  
GTTTTGATGGCTACAAATCGCATTGATATTTTGGATCAAGCCCTCCTTAGGCCTGGACGAATTGACAGGAAGATTGAGTTCCCAAATCCCAACGAAGAGgtatattt--cttcattaccgtatt-caattaatgcacttacgagatgaaaatttgcttcagctcttgtttgtttttccacatctatttagaggtgcctgtgt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60354034|gb|DN221007.1|DN221007
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|67018679|gb|CO447428.1|CO447428
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|32843443|gb|CD983124.1|CD983124
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|5607842|gb|AI901509.1|AI901509
EST:     CGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCNCGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: CGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|16926269|gb|BM079337.1|BM079337
EST:     CATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: CATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|6564061|gb|AW231683.1|AW231683
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATTCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|110525764|gb|EE029948.1|EE029948
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|211532760|gb|FL372716.1|FL372716
EST:     ATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: ATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|86470516|gb|DY236886.1|DY236886
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|32929081|gb|CF033893.1|CF033893
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCAT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|60398374|gb|DN231190.1|DN231190
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|60354159|gb|DN221132.1|DN221132
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|33095260|gb|CF055254.1|CF055254
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|67016311|gb|CO445060.1|CO445060
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|211487780|gb|FL049401.1|FL049401
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|5706265|gb|AI942041.1|AI942041
EST:     AGATTGAATTTCCAAATCCTAACGAGGAT                         TCNCGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: AGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|32846355|gb|CD986036.1|CD986036
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|60345693|gb|DN212666.1|DN212666
EST:     TTCCAAATCCCTAATGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: TTCCAAAT-CCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|32849664|gb|CD989345.1|CD989345
EST:     AAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAANAATGAACTTGATGCGT
genomic: AAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|44901517|gb|CK828062.1|CK828062
EST:     CGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: CGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|60350083|gb|DN217056.1|DN217056
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|211122652|gb|FL433068.1|FL433068
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|5847445|gb|AW000524.1|AW000524
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|60355211|gb|DN222184.1|DN222184
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|20301129|gb|BQ164072.1|BQ164072
EST:     GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATTCATTCAAGAAAAATGAACTTGATGCGT
genomic: GGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
EST: gi|5525808|gb|AI861701.1|AI861701
EST:     GATTGAATTTCCAAATCCTAACGAGGAT                         TCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT
genomic: GATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 47 (upstream exon), 49 (downstream exon)
Score: 336

GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGTGGCATTGATCTGAAAAAGATCGCGGAAAAGATGAATGGGGCCTCAGGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 233

GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGTGGCATTGATCTGAAAAAGATCGCGGAAAAGATGAATGGGGCCTCAGGAG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 274

GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGTGGCATTGATCTGAAAAAGATCGCGGAAAAGATGAATGGGGCCTCAGGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 424

GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttgg ... gcccttgcagTCACGTTTCGATATCTTGAAGATCCATTCAAGAAAAATGAACTTGATGCGTGGCATTGATCTGAAAAAGATCGCGGAAAAGATGAATGGGGCCTCAGGAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTTTGATGGCAACGAACAGAATAGACATTTTGGATCAAGCCCTTCTGAGGCCTGGCCGCATAGACAGGAAGATTGAATTTCCAAATCCTAACGAGGATgtatgtttggctaactcatcctgttatacctgttgattttacatggctactgctgctgacagggcgcttaatcttttgcccttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT