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GGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAATTCACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctgatcatttcacttctttcattgaagtggtgcttacatttcccctttttcatttcagagatacagttgttaactaaagttaaactgcatatt...
species | Zea mays |
transcript | GRMZM2G101250_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGTCATCCACACCATTCG AEST: gi|211065125|gb|FL021092.1|FL021092
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGTCATCCACACCATTCG AEST: gi|211065125|gb|FL021092.1|FL021092
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGTCATCCACACCATTCG AEST: gi|211065125|gb|FL021092.1|FL021092
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGTCATCCACACCATTCG AEST: gi|148934269|gb|EC878292.2|EC878292
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG GTCAGTATACAAGGATGCTGAGGAAGATACTCTGCCAAGCACATCTGATGAEST: gi|211065128|gb|FL021095.1|FL021095
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatagGTCAGTATACAAGGATGCTGAGGAAGATACTCTGCCAAGCACATCTGATGA
EST: TAEST: gi|211065128|gb|FL021095.1|FL021095
genomic: --
EST: TAEST: gi|211065128|gb|FL021095.1|FL021095
genomic: --
EST: TAEST: gi|211065128|gb|FL021095.1|FL021095
genomic: --
EST: TAEST: gi|211067851|gb|FL021097.1|FL021097
genomic: --
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211067851|gb|FL021097.1|FL021097
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211067851|gb|FL021097.1|FL021097
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211067851|gb|FL021097.1|FL021097
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065127|gb|FL021094.1|FL021094
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065127|gb|FL021094.1|FL021094
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065127|gb|FL021094.1|FL021094
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065127|gb|FL021094.1|FL021094
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065118|gb|FL021085.1|FL021085
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065118|gb|FL021085.1|FL021085
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065118|gb|FL021085.1|FL021085
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|211065118|gb|FL021085.1|FL021085
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|91056341|gb|EB166759.1|EB166759
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|91056341|gb|EB166759.1|EB166759
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|91056341|gb|EB166759.1|EB166759
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG AEST: gi|91056341|gb|EB166759.1|EB166759
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
EST: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCG A
genomic: CACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctg ... tgtcagatag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAATTCACTTGGACAGATGTGTCAGAGAGAATTATTAAGCCATCCACACCATTCGgtactttctgatcatttcacttctttcattgaagtggtgcttacatttcccctttttcatttcagagatacagttgttaactaaagttaaactgcatatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG