Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag

Basic information

species Zea mays
transcript GRMZM2G094051_T03
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os04g51630.2 (Oryza sativa), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttc-tatcag
|||||| |||||||||||| | || ||||||||||||||||||||||||||||| |||||||| || ||||||||  | |||||| |||||||||||||||||||  | |||| | ||| || | |  | | | |  | |||  ||   ||  |  |||||              | ||||||||  ||||||
CCCAAATTTGAAGAGTGTCCGTGAATTGATCTACAAGAGGGGCTATGGAAAGCTCAACAAGCAAAGAATCCCTCTTACAAACAACAAAGTCATCGAGGAGgtttgccaccttgaatctc-acttgttctgcttttactgtgtcaat---tggtaccttacag-------------tcttggtgtttgtatcag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os08g13690.1 (Oryza sativa), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgt--aaacttggaactctacatctggtt-cctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag
||||||| |||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||| |||||    |||||| ||||||| |||||||| |||     |||| |    | |||   |||   | | | |  |||| |  | |  |  | | |  |  |  ||   | |||||   | || ||
CCCAAACCTGAAGAGTGTCAGGGAATTGATCTACAAGAGGGGTTACGGAAAGCTCAACAAGCAGAGGATTCCTCTTCAGAACAACAAAGTCATTGAGGAGgtatgtttgctcttgtaggctttcattgtgttgtatatatgccatttacagctaatcaaattcttatt--tggcctattgttggtcaaccattag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: GLYMA15G18170.1 (Glycine max), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtt-tatatatgacaatttacatgatgatctccaccttt-tggtgttctat--cag
||| || ||||||||||| || || ||||||||||||||||||||||||||  | ||||||||||| ||  || || |  |||||    | || ||  ||||  ||    |     || ||   ||   |      |||  ||   | | ||     |||| |  |  | | | |     |    ||| ||  |||
CCCTAATTTGAAGAGTGTTAGAGAATTGATCTACAAGAGGGGCTATGGAAAAGTTAACAAGCAGAGAATTGCTTTGACAGACAACTCTATTATTGAACAGgtccgtgtggtctattctgtagtcctctgtaaacacttccattgcttgtttgttctattacttagtttttttccctgacataacattcaatgccag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: GLYMA09G06860.1 (Glycine max), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactcta--catctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctat--cag
||| || ||||||||||| |  || ||||||||||||||||||||||||||  | ||||||||||| ||  |  |     |||||    |  | ||  |||| |||    |       |||  |||||  |   | | | |  |   | | ||     ||||    |  | ||       |    ||| ||  |||
CCCTAATTTGAAGAGTGTAAAAGAATTGATCTACAAGAGGGGCTATGGAAAAGTTAACAAGCAGAGAATTGCCTTAAATGACAACTCTATTGTTGAACAGgtctgtctggtgtaccggctagtcatctt-taaatatctccattgcttgtttgttctattactcagttttttcgctgacataacattcaatgccag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: GLYMA08G23750.2 (Glycine max), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgt-ttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgac---aatttacatg-atgatctccaccttttggtgttctatcag
||||||  | |||||||| || ||  | || |||||||| || ||||||||||| |||||||||||||   ||||  |  |||||    |||| ||| |||| |||| || ||  || |||  ||        ||  ||   |   || |||      | || | || ||||                         
CCCAAATCTTAAGAGTGTGAGAGAACTTATTTACAAGAGAGGGTATGGAAAGCTAAACAAGCAGAGGACTGCTCTAACTGACAACTCCATCATTGAGCAGgtattgttaatttacaattctgtattacaaatttgaattaattcactacatgcttctgacttgcttggatgacag----------------------

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: AT2G01250.2 (Arabidopsis thaliana), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatct---ggttcctgtgttctgtttatatatgacaatttaca-tgatgatctccaccttttggtgttctatcag-------------------------------------------------------------------------------------
||| |||||||||||||||| ||| |||||||||||||| || || |||||||| ||| | ||||||||  || || |  |||||    |  | ||| ||||||| | |  ||   ||||    ||   | ||| |  ||| ||||   |||| |   || | | | | ||  ||  |  ||   |     | ||                                                                                      
CCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTACGGAAAGCTTAACCACCAGAGGATAGCTTTGACTGACAACTCTATTGTAGAGCAGgtttg-agatctgtctctctgtggctcttgcttctttagttttgttctgatatcaagtttaagactcacgaattcttc--ttccatacaaaaccaaaatcaggctcttggaaagcatggtatcatttgcactgaggatttgatccacgagattctaacagtaggacctcatttcaaggaag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: AT2G01250.1 (Arabidopsis thaliana), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatct---ggttcctgtgttctgtttatatatgacaatttaca-tgatgatctccaccttttggtgttctatcag------
||| |||||||||||||||| ||| |||||||||||||| || || |||||||| ||| | ||||||||  || || |  |||||    |  | ||| ||||||| | |  ||   ||||    ||   | ||| |  ||| ||||   |||| |   || | | | | ||  ||  |  ||   |     | ||       
CCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTACGGAAAGCTTAACCACCAGAGGATAGCTTTGACTGACAACTCTATTGTAGAGCAGgtttg-agatctgtctctctgtggctcttgcttctttagttttgttctgatatcaagtttaagactcacgaattcttc--ttccatacaaaaccaaaatcag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: Vv09s0054g00010.t01 (Vitis vinifera), 5'ss of exon 5
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttc-tgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag
||| || |||||||||||  | || ||||| ||||||||||| ||||||||| ||||||||||||| |   |  || || |||||    |  | ||  |||||| ||    ||  | |||  |||| | |  | | |    | || | |   | |  ||   || | | || |   || || || |       
CCCCAATTTGAAGAGTGTGCGAGAATTGATTTACAAGAGGGGGTATGGAAAGTTGAACAAGCAGAGAACTGCCTTGACCGACAACTCCATTGTGGAACAGgttttta----tgtcattctgtatcttggttttctatgagcgattgtttgctatatcttgt-tgctaacctgc-ttttgtgatgatag-----

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: Vv09s0054g00030.t01 (Vitis vinifera), 5'ss of exon 5
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttc-tgtttatatatgacaatttacatgatgatctccaccttt--tggtgttctatcag----------
||| || |||||||||||  | || ||||| ||||||||||| || |||||| ||||||||||||| |   |  || || |||||    |  | ||  |||||| ||    ||  | |||  |||| | |  | | |   || || | |   | |  ||   || | | || |   | |  || |   || |  |          
CCCCAATTTGAAGAGTGTGCGAGAATTGATTTACAAGAGGGGGTACGGAAAGTTGAACAAGCAGAGAACTGCCTTGACCGACAACTCCATTGTGGAACAGgttttta----tgtcattctgtatcttggttttctatgagtgattgtttgctatatcttgt-tgctaacctacttttgtgatgataggctttggggaagtttggt

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: Vv11s0052g00290.t01 (Vitis vinifera), 5'ss of exon 6
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag--
 || || || ||||||||||||||  |||| ||||||||||| |||||||| || ||||||||||| |   ||||| |  | |||  | |||| ||  ||||||||     || |  | || ||    ||  | |||||  | |||   |   || |  | |    ||    || ||||||| |  |||     
TCCCAATTTAAAGAGTGTCAGGGAACTGATTTACAAGAGGGGTTATGGAAAACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgt-----tgtaggt-taaataacatttatatgttcgatgtattgctataaactggcttttcaat---gacattttggtatgttattgcag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: Vv09s0054g00140.t01 (Vitis vinifera), 5'ss of exon 4
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag
||| || |||||||||||  | || ||||| ||||||||||| ||||||||| ||||||||||||| |   |  || || |||||    |  | ||  |||||| ||    ||  | |||  |||| |     || |||| |       ||     ||  ||  || |    ||||  |  |||  |   ||
CCCCAATTTGAAGAGTGTGCGAGAATTGATTTACAAGAGGGGGTATGGAAAGTTGAACAAGCAGAGAACTGCCTTGACCGACAACTCCATTGTGGAACAGgttttta----tgtcattctgtatcttg-----gttttctatgagcgattgtttgctt-tatcttgttgctaacctgcttttgtgatgatag

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: Vv09s0054g00090.t01 (Vitis vinifera), 5'ss of exon 4
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag
||| || |||||||||||  | ||  |||| ||||||||||||||||||||| ||||||||||||| |   |  || || |||||    |  | ||  |||||| ||      | |   |      ||||  | |     | || | |   | |  ||   || | | || |   || || || |       
CCCCAATTTGAAGAGTGTGCGAGAACTGATTTACAAGAGGGGCTATGGAAAGTTGAACAAGCAGAGAACTGCCTTGACCGACAACTCCATTGTGGAACAGgtttttatgtcctgtatctt------ggttttttttgagggattgtttgctatatcttgt-tgctaacctgc-ttttgtgatgatag-----

upper sequence: GRMZM2G094051_T05 (Zea mays), 5'ss of exon 5
lower sequence: PP1S11_173V6.1 (Physcomitrella patens), 5'ss of exon 5
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgt-ttgtaaacttggaactcta---catctggttcctgtgttctgttta-tatatgacaatttacatgatgatctccaccttttggtgttct---atcag
||| ||||||||||||||| ||||||||||||||||| | || || |||||  | ||||||  | | | | ||||  |  |||||    |||||||  |||| |||| |   ||    |||     |   || |    ||   ||  || |   |      ||||   | | | |     || |||  |  |   || | 
CCCGAACTTGAAGAGTGTCCGGGAGTTGATCTACAAGCGTGGGTACGGAAATGTAAACAAGTCGCGCACCGCTCTTACGGACAACACCATCATCGAAAAGgtattgttatagtgactatcttatttactcgggtggaatgacatgggtagttctttgtggattactcaaagctatgattattgtggaatatttaaattaa

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211177245|gb|FL341482.1|FL341482
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|78026781|gb|DV495168.1|DV495168
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|19436979|gb|BM953389.1|BM953389
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|18178123|gb|BM379333.1|BM379333
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|71311932|gb|DR792458.1|DR792458
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211162458|gb|FL355955.1|FL355955
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGAT
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGAT
EST: gi|94472207|gb|EB701165.1|EB701165
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211094483|gb|FL367316.1|FL367316
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAG
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAG
EST: gi|9732809|gb|BE511561.1|BE511561
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGTGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211041717|gb|FL025840.1|FL025840
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|78112606|gb|DV531000.1|DV531000
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCA-CAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACCAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60349187|gb|DN216160.1|DN216160
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|71759958|gb|DR957895.1|DR957895
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGGTTGGGCAAGCACAACATCATTTGCATTGAGGATTTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|93016886|gb|EB642406.1|EB642406
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211044671|gb|FL025842.1|FL025842
EST:     AGCTGCATAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACACCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|31558660|gb|CD527872.1|CD527872
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|31611989|gb|CD568611.1|CD568611
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|71425539|gb|DR806740.1|DR806740
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|22545876|gb|BU098115.1|BU098115
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|7216487|gb|AW562609.1|AW562609
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|101401380|gb|EB822367.1|EB822367
EST:     AGCTGAACAAGCAGAGGATTCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGGTTGGGCAAGCACAACATCATCTCCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|67011751|gb|CO440500.1|CO440500
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|29130012|gb|CB380716.1|CB380716
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|86471442|gb|DY237812.1|DY237812
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60352654|gb|DN219627.1|DN219627
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|9255093|gb|BE345561.1|BE345561
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|37397315|gb|CF635954.1|CF635954
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCATGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60355362|gb|DN222335.1|DN222335
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60396956|gb|DN229775.1|DN229775
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|5152780|gb|AI759078.1|AI759078
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60349587|gb|DN216560.1|DN216560
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211374992|gb|FL316972.1|FL316972
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTG
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTG
EST: gi|211216313|gb|FL351396.1|FL351396
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|29946407|gb|CB816135.1|CB816135
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|5915417|gb|AW053058.1|AW053058
EST:     AGCTGAACAAGCAGAGGATCCCTCTATCAAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60345376|gb|DN212349.1|DN212349
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211041714|gb|FL025837.1|FL025837
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211406874|gb|FL447487.1|FL447487
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|71311933|gb|DR792459.1|DR792459
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|37394639|gb|CF634595.1|CF634595
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60357813|gb|DN224786.1|DN224786
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211041713|gb|FL025836.1|FL025836
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|29130370|gb|CB381074.1|CB381074
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211436246|gb|FL480992.1|FL480992
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60394900|gb|DN227769.1|DN227769
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60352160|gb|DN219133.1|DN219133
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACAT
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACAT
EST: gi|71439147|gb|DR820197.1|DR820197
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|19058687|gb|BM737354.1|BM737354
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAAC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAAC
EST: gi|9566170|gb|BE475679.1|BE475679
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|32849509|gb|CD989190.1|CD989190
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60354480|gb|DN221453.1|DN221453
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|29544066|gb|CB604446.1|CB604446
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|28873880|gb|CB329810.1|CB329810
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60348516|gb|DN215489.1|DN215489
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211041715|gb|FL025838.1|FL025838
EST:     GCTG-CCTTAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: GCTGAAC-AAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|4646780|gb|AI621855.1|AI621855
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|4887399|gb|AI677498.1|AI677498
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60399439|gb|DN232251.1|DN232251
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|93016887|gb|EB642407.1|EB642407
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|50323404|gb|CO518530.1|CO518530
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|67020255|gb|CO449004.1|CO449004
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60393984|gb|DN226854.1|DN226854
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATTTGCATTGAGGATTTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|32165010|gb|CD670328.1|CD670328
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|101392068|gb|EB817961.1|EB817961
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|50323403|gb|CO518529.1|CO518529
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATTTGCATTGAGGATTTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|28873719|gb|CB329668.1|CB329668
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|5108253|gb|AI739966.1|AI739966
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60348815|gb|DN215788.1|DN215788
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|9461696|gb|BE453859.1|BE453859
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211041716|gb|FL025839.1|FL025839
EST:     ATCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|9255094|gb|BE345562.1|BE345562
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCA
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCA
EST: gi|211007030|gb|FL327098.1|FL327098
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211055938|gb|FL348468.1|FL348468
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCA
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCA
EST: gi|28909548|gb|CB330985.1|CB330985
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|33090919|gb|CF050913.1|CF050913
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|211108757|gb|FL337429.1|FL337429
EST:     GCTGAACAAGCAGAGGATCCCTCTGTCCCACAACCCAGTCATCGAGGGAG                         G-CTTGGGCAAGCACAACATCATCTGCATTGA
genomic: GCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGG-AGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGA
EST: gi|67013052|gb|CO441801.1|CO441801
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCGCGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|15632506|gb|BI679599.1|BI679599
EST:     CCCTCTATCAAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: CCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|9731382|gb|BE510134.1|BE510134
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGG
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGG
EST: gi|211004257|gb|FL327092.1|FL327092
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|120480075|gb|EH210722.1|EH210722
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATTTGCATTGAGGATTTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|31359055|gb|CD443412.1|CD443412
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|14203281|gb|BG836958.1|BG836958
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|60399095|gb|DN231909.1|DN231909
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|101401382|gb|EB822368.1|EB822368
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|78091998|gb|DV520372.1|DV520372
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|71757280|gb|DR955217.1|DR955217
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|28930957|gb|CB334318.1|CB334318
EST:     AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCA
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCA
EST: gi|76281807|gb|DV021375.1|DV021375
EST:     AGCTGAACAAGCAGAGGTTCCCTCTGTCCAACAACCAAGTCATCGAGGAG                         GGGTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: AGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
EST: gi|6448416|gb|AW181182.1|AW181182
EST:     CAAGCAGAGGATCCCTCTATCAAACAACCAAGTCATCGAGGAG                         GGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC
genomic: CAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 1332

CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1378

CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1111

CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCAT


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 547

CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaac ... gttctatcagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCAT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCCAAACTTGAAGAGTGTCAGGGAGTTGATCTACAAGAGGGGCTATGGAAAGCTGAACAAGCAGAGGATCCCTCTGTCCAACAACCAAGTCATCGAGGAGgtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctatcag

- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG