1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGAGGCTGCAATATTGCATGGGGATGATTATGCCGGTTCTCTAGAAGATAGCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgactgcaaatttcatttctgatacttcgctaagtttcctttctaaagtaattatggcacatctttttttatcctctgcag
species | Zea mays |
transcript | GRMZM2G090156_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACA GTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAATEST: gi|22935443|gb|BU571718.1|BU571718
genomic: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgac ... tcctctgcagGTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAAT
EST: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACA GTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAATEST: gi|74240991|gb|DT648905.1|DT648905
genomic: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgac ... tcctctgcagGTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAAT
EST: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACA GTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAATEST: gi|87156558|gb|DY401347.1|DY401347
genomic: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgac ... tcctctgcagGTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAAT
EST: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACA GTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAAT
genomic: GCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgac ... tcctctgcagGTGTTTGAACAAATTCCTGGGACCCTCCTAATCAAAGGTTCATTATTGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGCTGCAATATTGCATGGGGATGATTATGCCGGTTCTCTAGAAGATAGCTCTGCAAAGTTACAATGCGTTGTCAAGGGAATATCATTTCGTATTACAgtatgttgactgcaaatttcatttctgatacttcgctaagtttcctttctaaagtaattatggcacatctttttttatcctctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG