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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAAGAACTGTGCAAATTCTATTCTCGTTACGGCATCTGCAAGTTCGGCGCCAACTGTAAATTCGACCATCCTACAGTGGTTGCTCCAATGGTCTATGCgtatggtttctccgcgtctgcttcccctgcatccgcttcgactaatgtacctatggcgcgacgccttctgggatccccaccggggtctggatatacatcttaggcgtcgttttttttttcag

Basic information

species Zea mays
transcript GRMZM2G087032_T04
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71757972|gb|DR955909.1|DR955909
EST:     GCCAACTGTAAATTCGACCATCCTACAGTGGTTGCTCCAATGGTCTATGC                         TTGACCTACTTCGATTTATAAAATCCATGGCACTGCCTCAGGCGCTGTGAA
genomic: GCCAACTGTAAATTCGACCATCCTACAGTGGTTGCTCCAATGGTCTATGCgtatggtttc ... tttttttcagTTGACCTACTTCGATTTATAAAATCCATGGCACTGCCTCAGGCGCTGTGAA
EST: gi|71759560|gb|DR957497.1|DR957497
EST:     GCCAACTGTAAATTCGACCATCCTACAGTGGTTGCTCCAATGGTCTATGC                         TTGACCTACTTCGATTTATAAAATCCATGGCACTGCCTCAGGCGCTGTGAA
genomic: GCCAACTGTAAATTCGACCATCCTACAGTGGTTGCTCCAATGGTCTATGCgtatggtttc ... tttttttcagTTGACCTACTTCGATTTATAAAATCCATGGCACTGCCTCAGGCGCTGTGAA