1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATATGACAAACCAGCAGTTAATGGATCAAGGCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatacttatttatgacctgcatgtgagcttatagcatcattttcctaggaacagctgttgatcttgtttaacaagttgaaaatctgtgctcacaaag...
species | Zea mays |
transcript | GRMZM2G065105_T02 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|76020464|gb|DT947634.1|DT947634
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|60340573|gb|DN207546.1|DN207546
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|89246761|gb|DY618548.1|DY618548
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTTTGAAAEST: gi|74237187|gb|DT645101.1|DT645101
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|71770343|gb|DR968280.1|DR968280
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|37374830|gb|CF623807.1|CF623807
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: ATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|60356243|gb|DN223216.1|DN223216
genomic: ATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: CACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|148986505|gb|EE030255.2|EE030255
genomic: CACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|71761831|gb|DR959768.1|DR959768
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|60394000|gb|DN226870.1|DN226870
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|78088594|gb|DV516987.1|DV516987
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAAEST: gi|14243604|gb|BG841264.2|BG841264
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
EST: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAG ACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
genomic: GCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatactt ... tattttgtagACTGTCCAAGAAACCGTCAATGTGGGCACAGAAACTGCAGCTGCTCTGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGACAAACCAGCAGTTAATGGATCAAGGCAATCAACTAATGGATGAAACTGATCAAGCTATTGCACGATCTAAGCAGgttaatacttatttatgacctgcatgtgagcttatagcatcattttcctaggaacagctgttgatcttgtttaacaagttgaaaatctgtgctcacaaag
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