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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCGTTCGGGGCGCACCGCTGGCTCGCCGCGCTGCAGCGTGCGTGCGAGCGGTTTGCGTCCCTGGCCACCCTCGGCGTGCCGCACCACGACGTCGCCGGAGgtatagtacaagctatccagcaattctgtggatcgaatcagaatgtgagcgttcctggtttcttttggttggcag

Basic information

species Zea mays
transcript GRMZM2G062318_T01
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G062318_T01 (Zea mays), 5'ss of exon 6
lower sequence: LOC_Os06g10600.1 (Oryza sativa), 5'ss of exon 7
---GCGTTCGGGGCGCACCGCTGGCTCGCCGCGCTGCAGCGTGCGTGCGAGCGGTTTGCGTCCCTGGCCACCCTCGGCGTGCCGCACCACGACGTCGCCGGAG-
   |||||||||||||||||||||||||||||||| ||||| ||||||||||| |  || ||||| | | | |||||||| |||||||||  || ||  ||         ||  ||  |  |  ||| |||   |   || |      ||    ||  |      | ||  || || |     |||||||        
GCCGCGTTCGGGGCGCACCGCTGGCTCGCCGCGCTCCAGCGCGCGTGCGAGCGCTACGCCTCCCTCGTCGCGCTCGGCGTCCCGCACCACATCGCCGGTGgtatgcacccgtcgagcgctcgacatcacagtcgtcgttgcgtttttctctcgccatgacactgacattgtccgggctcgccatggttgggcacgcag